Avogadro Project

@avogadro.cc

Advanced molecule editor and visualizer Building the next generation of molecular and materials visualization and editing tools https://avogadro.cc/ https://discuss.avogadro.cc/

Coming soon in Avogadro 2.0… 👀 Loadable energy plugins, including ML (ANI, AIMNET, MACE …) and XTB (GFN-FF, GFN1, GFN2) Easy to add .. what models would you want to see?

Screenshot showing a dialog "Geometry Optimization Parameters" with a section "Optimization Method" and "Force field" with a popup menu with a long list: AIMNet2, AIMNet-NSE, ANI-1x, ANI-2x, GAFF, GFN-FF, GFN1, GFN2, LJ, MMFF94, UFF and in the background are "Convergence Criteria" Energy convergence and Gradient convergence and Step limit: 5000 steps, with buttons Cancel and OK

Obviously a lot is going on (gestures widely) Amid chaos, I cope by doing *something* -- anything. Lately, it's been coding for @avogadro.cc because it feels like some small change I can do myself For *years* I've wanted to show electron density volumes .. little clouds ☁️☁️ #compchem

Rendering of highest occupied molecular orbital (HOMO) of a conjugated molecule showing conventional orbital isosurfaces in red and blue bubbles.Rendering of highest occupied molecular orbital (HOMO) of a conjugated molecule showing volumetric electron density in shades of red and blue clouds

We just uploaded a video showing off the new template tool, building up triphenyl phosphine oxide. You can easily add atoms with specific geometries, and click to add functional groups. We include over 150 with 2D previews. Suggestions always welcome: discuss.avogadro.cc youtu.be/RC4NZp6nnD8

Building Molecules with Templates

YouTube video by Avogadro Project

youtu.be

Avogadro Project@avogadro.cc · 9mo ago

We've been starting up some tutorial videos on Avogadro2 🎬🍿 www.youtube.com/@AvogadroPro... What topics would you like us to cover? Let us know over at discuss.avogadro.cc #compchem #chemsky

Thanks to a suggestion from a user, we've been working on some tweaks to the draw tool... Now you can click on a hydrogen atom to change the element and the bond will grow longer or shrink as needed Coming soon to the next release (or in a nightly build)