So the AI agent that tried to publicly shame one of the matplotlib maintainers for closing his PR happens to also open PRs in rdkit, openbabel, pyscf, and other compchem libraries... Oh dear
Cédric Bouysset
@cedric.bouysset.net
Cheminformatics, Open-source software, Machine-learning 🤖 Developer of ProLIF and mols2grid 🐱💻 Bass and video games 🎸🎮 Oxford, UK
Mols2grid 2.2.0 is out with full Marimo support 🎅 Huge thanks to @n283t.bsky.social for the contribution! See this for an example linking mols2grid selections with marimo's UI table: github.com/cbouy/mols2g... N283T: x.com/tbsng_ktkm0923
David Errington and Cédric Bouysset @recursionpharma.bsky.social recently published a study that challenges the current benchmarks in protein–ligand pose prediction. Register for the upcoming webinar to learn more: attendee.gotowebinar.com/register/599... ⌛9th Sept - 15:00 (BST) #DrugDiscovery
Our work “Assessing interaction recovery of predicted protein-ligand poses” with David Errington, @cschneider.bsky.social and @fdreyer.bsky.social, previously presented at NeurIPS, is now published in the Journal of Cheminformatics! 🎉 Check out the full paper here: rdcu.be/emKgd
Assessing interaction recovery of predicted protein-ligand poses
rdcu.be
#mdaUGM2025 is officially happening! Abstracts and travel bursary applications are being accepted from now until the July 15, 2025 deadline: www.mdanalysis.org/2025/04/13/u.... 🗓️ November 9-11, 2025 📍Tempe, Arizona, USA (and online) #open-source-software #molecular #simulations #streaming
We're offering a fully funded PhD at the intersection of ML/AI and the natural sciences with a focus on sustainability and chemistry. You'll work at WUR in the Netherlands, ranked #3 in environ. sciences, #1 in agricultural science, #38 in life sciences (QS). Apply here: www.wur.nl/nl/vacature/...
Happy to share that I'll be once again mentoring Google Summer of Code applicants with MDAnalysis 🤠 This year, alongside pure-MDAnalysis projects, we have collaborative projects on MolecularNodes, WESTPA... and 3 projects ideas for ProLIF ✨ More info in the post below 👇
MDAnalysis is participating in Google Summer of Code 2025! Do you like #coding to solve problems in #biophysics #chemistry or #materials? Read our blog on how to apply: www.mdanalysis.org/2025/02/28/g.... Pre-proposals are due March 21st. We value transparency; please communicate in public forums.
Here's a first: I'm hiring a PhD student. If you have (or know someone who has) a strong background and interest in computational (bio)chemistry or computer science (especially 3D computer vision), let's work together 😊 www.wur.nl/nl/vacature/...
PhD student - Machine learning in bio- and cheminformatics
wur.nl