Context Lab

@contextlab.bsky.social

A motley crew of science nerds trying to understand the inner workings and limits of human memory. Plus some Bayesian stuff...and 🧁. Director: @jeremyrmanning.bsky.social https://www.context-lab.com

Check out our latest collab with Manish Saggar, @richardfbetzel.bsky.social, et al. (lead: Chunyin Siu)! We use TDA to show that 2nd-order (edge) brain interactions more distinctly segregate task connections than other kinds of network patterns. Paper/code/data: www.biorxiv.org/content/10.6...

Global topology of brain-wide co-fluctuations links task states, personality, and behavioral symptom dimensions

Functional connectivity in network neuroscience is traditionally characterized using time-averaged correlations between brain regions. While these summaries capture stable large-scale organization, they do not fully reflect the temporal structure of moment-to-moment interactions. Here, we investigate how the order of interaction used to represent brain dynamics shapes the organization recovered from neural data. We compare three interaction representations of fMRI dynamics: regional activation (node time series), pairwise co-fluctuations (edge time series), and higher-order triplet interactions (triangle time series); within a common topological framework using Mapper from topological data analysis (TDA). Across task and resting-state data, Mapper representations derived from pairwise co-fluctuations more distinctly segregate task conditions than activation-based or higher-order representations. This organization reflects structured coordination patterns beyond activation polarity and is driven by high-amplitude interaction events. Beyond task states, modularity quality computed across all Mapper representations is highest for edge time series and selectively associated with stable individual differences: higher modularity relates to higher conscientiousness and lower internalizing and externalizing symptom dimensions. Together, these findings suggest that behaviorally relevant information is reflected in the topology of moment-to-moment brain interactions. Topological analysis of interaction-level dynamics therefore provides a complementary and interpretable framework for linking large-scale neural coordination to cognition, personality, and mental health. ### Competing Interest Statement The authors have declared no competing interest. National Institute of Mental Health, https://ror.org/04xeg9z08, MH127608 Stanford Maternal and Child Health Research Institute, https://ror.org/00yt0ea73, Faculty Scholar Award

biorxiv.org

With our v1.0 release, dream-stream now comes in Android 🤖! context-lab.com/dream-stream...

context-lab.com

Jeremy Manning@jeremyrmanning.bsky.social · 7mo ago

I made a quirky little web app to help guide your lucid dreams: context-lab.com/dream-stream/ It's kind of like a "netflix" or "spotify" for lucid dreaming-- you select different narratives to form a playlist, and then it uses your device's microphone to start playing when it detects you're in REM.

Remember when grinding leetcode was still a thing? If you'd like to hone your coding skills, or even just return to that simpler time for nostalgia's sake, you might enjoy this project from our group: github.com/ContextLab/l... Happy hacking! 👩‍💻

GitHub - ContextLab/leetcode-solutions: Leetcode discussions, brainstorming, musings, and solutions

Leetcode discussions, brainstorming, musings, and solutions - ContextLab/leetcode-solutions

github.com

Excited to have this out in @natureportfolio.bsky.social! We found that real & fictional people communicate roughly 1.5x more about the past than the future. In turn, this influences the interferences we make about past & future events in *other* people's lives. www.nature.com/articles/s41...

Temporal asymmetries in inferring unobserved past and future events - Nature Communications

Memories of our past experiences enable us to reconstruct (in the present) our past better than our future. Here, the authors show that we are also able to better reconstruct the pasts (versus futures...

nature.com

Context Lab@contextlab.bsky.social · 3y ago

🚨 Updated preprint (lead: @xxming.bsky.social) on how inferences about unobserved past/future events are informed by conversations! osf.io/yp2qu/ 🚨 This update includes a new pre-registered replication + meta analysis. We think we've found some neat fundamental properties of human conversation! 🧪🧠

Imagine Google Colab notebooks that support: ✔️ Automatic dependency installs ✔️ Pinned package versions ✔️ Ability to download/run locally without additional setup "pip install davos" today! Share + vote for "default" Colab integration by clicking the 👍 here: github.com/googlecolab/...

Add a new package, `davos`, to the set of preinstalled packages in colaboratory to help manage depen...

Is your feature request related to a problem? Please describe. I've run into several dependency-related "frustrations" when sharing colaboratory notebooks: Importing packages that aren't included i...

github.com

Hello blue sky! Our lab studies #learning & #memory. We do roughly 50% cog sci style studies and 50% brain networky things, with some overlap where possible. Lately we've been excited about real-world memory in classrooms and conversations. We'll use this account to share our papers/software! 🧑‍🔬🧪🧠🧑‍💻