Kevin Bennett

@kevinfpbennett.bsky.social

Postdoc, Penn State University. Evolution. Hybridization. Sexual selection. Birds.

Excited to share a preprint of my 3rd dissertation chapter! We evaluated how a potential genomic measure of sexual selection strength, the ratio of genetic diversity on the Z chromosome vs the autosomes, varies across selective and biogeographic contexts in #manakins. Check it out! bit.ly/4fY43de

Can the Z:A ratio serve as a genomic index of sexual selection? An assessment across space and time in a genus of lekking birds

Understanding the role of sexual selection in shaping evolutionary trajectories is a key goal of biology, and thus developing a genomic measure of sexual selection strength is desirable. In systems wi...

biorxiv.org

How good is MiniBWA, the successor to BWA? To test it, I ran MiniBWA on sequencing from 76 different species, comparing mapping speed, rate and accuracy with BWA MEM. In short, it's really good. If you map short reads, it's well worth your time. andrewcarroll.github.io/2026/06/30/t...

The Best of Both Worlds - Assessing MiniBWA

Recently, Heng Li released MiniBWA (GitHub) alongside a paper by Heng Li and Nils Homer describing the method (paper). MiniBWA builds on the approaches in Minimap2 (also by Heng Li), but falls back on...

andrewcarroll.github.io

Wherein we developed a new phylogenetic method to demonstrate well-supported linkages between diet, plumage, and breeding system, and further linked all of this to a bevy of research on taste receptors, fruit toxins, digestion, and genetics in manakins. Press release: www.mpg.de/26796412/evo...

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Alice Boyle@birdfiddler.bsky.social · 2mo ago

#NewPaperAlert! This one has a massive author list and has been a LONG time in coming, but is SO COOL! First, check out the first figure to get you interested! Manakins! Fruit! Sexual-selection in action (displays and Z:A chromosomal diversity)! Read on for the back story & link 1/n

above: montage of brightly coloured tropical birds, some in interesting display postures, some eating fruit
below: a phylogeny that includes those same taxa (and others) and a plot of the ratio of genetic diversity on the autosomes relative to the Z chromosomes

The flagship paper from the amazing Manakin Research Coordination Network is finally published! The time I spent with these people was the most rewarding part of my PhD.

Alice Boyle@birdfiddler.bsky.social · 2mo ago

#NewPaperAlert! This one has a massive author list and has been a LONG time in coming, but is SO COOL! First, check out the first figure to get you interested! Manakins! Fruit! Sexual-selection in action (displays and Z:A chromosomal diversity)! Read on for the back story & link 1/n

above: montage of brightly coloured tropical birds, some in interesting display postures, some eating fruit
below: a phylogeny that includes those same taxa (and others) and a plot of the ratio of genetic diversity on the autosomes relative to the Z chromosomes

📢New warbler research!📢 A phylogeny of Myioborus (the youngest genus of warblers) plus a hypothesis for how they diversified in South America and a gene causing a color difference between hybridizing species. It was great co-leading this with Laura Céspedes Arias. doi.org/10.1093/evol...

Diversification and divergence in Myioborus warblers: insights into evolutionary relationships and plumage genetics

Abstract. Genomic data can provide valuable insights into the evolutionary history of rapidly diversifying groups and the genetic basis of phenotypic trait

doi.org

I made a little android app to better explore what species are around! It's called Manakin (play on the Merlin app) and it lets you download and explore iNat data. It can also help you plan out trips and remind you when your target species is active.

Home page of manakin app showing some butterflies found in connecticutA species page for Spring Azure, photo at the top, then the phenology plotted as a histogram, and some information about the species. The dataset loading page, you can request a location, taxa, and the minimum observationsAn organism of the day page showing a Four-toed Salamander