Introducing ParTIpy, a python package for Pareto Task Inference that scales to large-scale datasets, including single-cell and spatial transcriptomics. 🔗 Manuscript: www.biorxiv.org/content/10.1... 💻 Code: partipy.readthedocs.io

Would be happy to be a faculty mentor for PD candidates with interests in our labs work. We're building a foundation of 10,000s of highly interpretable, robust, efficient deep learning models of multiple layers of gene regulation across fetal and adult cell states. 1/

Sam Rodriques@sgrodriques.bsky.social · 2y ago

Applications for the FutureHouse Independent Postdoctoral Fellowship are due in two weeks! $125k annual stipend, full access to our resources, be coadvised by world class professors and apply our AI science agents to make new discoveries. Apply! Details here: www.futurehouse.org/fellowship

JOB OPPORTUNITY: Join us as a scientific programmer to advance tools for multi-omics data at Heidelberg University. Details can be found at shorturl.at/OcnOa and please spread the word!

We will be at the inaugural #ESSB conference this week in Berlin: @mariapuschhof.bsky.social a talk on multi-modal brain tumor profiling, @psl-schaefer.bsky.social @tanevski.bsky.social a poster on analyzing condition/temporal spatial data, @changlu9.bsky.social @tanevski.bsky.social [1/2]

We present NetworkCommons, a unified platform 🪐 for network biology, providing access to omics data, knowledge, and contextualization methods, all with a consistent API 👇🧵 Paper: doi.org/10.1101/2024... Docs: networkcommons.readthedocs.io