so pleased to be at the #MicrobialGenomics ECR Symposium today where our ECRs are presenting their latest work Our @eh-hayles.bsky.social just gave her talk about gene, genomic & phage variation in STEC stx2a in England. She could be your future microbial genomics bioinformatician! #openforhire
Eleanor Hayles
@eh-hayles.bsky.social
PhD candidate investigating genomic epidemiology of SARS-CoV-2 & STEC at the Quadram Institute with @langridgelab.bsky.social 🧬🦠👩🏻💻 | she/her
🚨Two exciting updates! The first, our new preprint assessing the dynamics of Shiga toxin subtype #stx2a in #STEC across England, 2016-2024 is now live! Read the preprint here: www.biorxiv.org/content/10.6...
biorxiv.org
Excited to share our latest preprint! Food surveillance detects lots of #Salmonella but only some cause disease. Using large-scale #genomics, we show that risk: - clusters at the lineage level, driven by mobile genetic elements - markers can be IDed including a phage in Agona - can be predicted
doi.org
This is no April fools!!! 🚨 @langridgelab.bsky.social has a funded #PhD for UK candidates Do you love #microbiomes, #bioinformatics & translational science? Come & join us, & @andrewjpage.bsky.social at @originsciences.bsky.social & get stuck into a ton of #metagenomic data🧬 Apply by 8 April
PhD A matter of gut instinct: from mucus to microbiome (LANGRIDGE_Q26MMBiCASE) 2026/27 | UEA
PhD A matter of gut instinct: from mucus to microbiome (LANGRIDGE_Q26MMBiCASE) 2026/27 | UEA
tinyurl.com
Evolution incoming!🦠 Langridge Lab and co from @quadraminstitute.bsky.social are at Norwich Science Festival today hosting Evolve, Survive, Thrive! 🧬 Can you work out what bacteria need to survive in the human gut? Or how about under the sea? Come and see if you can create the ultimate survivor! 👩🔬
📻 Tune into BBC Radio Norfolk at 2.20pm to hear our researcher @emmabeansworth.bsky.social talk about the launch of the 'Am I a Scientist' online teaching resource ⤵️ buff.ly/QdHqWf4
Radio Norfolk - Listen Live - BBC Sounds
Listen live to Radio Norfolk on BBC Sounds
bbc.co.uk
No! You're a toxic burden?! 😅 Ever wonder how bacteria become more toxic via phages? & how public health dealss with this 🤔 this project could be for you🦠🏥🧬 The @langridgelab.bsky.social is looking for #PhD candidates to join the group in October 2026 - please share! Apply by 6 Jan🗓️ #PhDposition
PhD Carrying a toxic burden: the continuing spread of “Shiga toxin stx2a”-harbouring phage in E. coli (LANGRIDGE_Q26MMB) 2026/27 | UEA
PhD Carrying a toxic burden: the continuing spread of “Shiga toxin stx2a”-harbouring phage in E. coli (LANGRIDGE_Q26MMB) 2026/27 | UEA
tinyurl.com
🚨Funded PhD with @mmbdtp.bsky.social & @gemma-langridge.bsky.social Brilliant project in a brilliant programme, with a great supervisory team!
🚨 Another funded PhD alert🚨 We are recruiting again! For a PhD student to start with us in the @langridgelab.bsky.social October 2026 - please share 👀 If you are interested in foodborne pathogens, public health and phage, look no further 🦠🏥🧬 ➡️ tinyurl.com/3zvavp2t ⬅️ Apply by 6 Jan 2026 🗓️
Funded PhD position available in @langridgelab.bsky.social! Excellent project in a very supportive, driven & knowledgable group 🧬
🚨 Funded PhD alert 🚨 We are recruiting for a PhD student to join the @langridgelab.bsky.social in October 2026 - please share! If you like bacteria, genomics and puzzles, this could be the project for you 🦠🧬🧩 Apply by 2 Dec 🗓️ #PhDposition Find out more ⬇️ www.uea.ac.uk/course/phd-d...
Lovely reminder from @langridgelab.bsky.social that today’s actually the first day of the final year of my PhD – only a slightly daunting prospect…
Delighted to share that @stevenrudder.bsky.social has passed his viva today!! Congratulations Dr Rudder, and a huge thank you to @alisonmather.bsky.social and Prof Adrian Egli for examining. Steven, this is so well deserved, we're all super proud of you #PhDone
Lovely to see that our latest paper investigating #SARS-CoV-2 genomic epidemiology in #Norfolk was one of the most read papers last month in #MicrobialGenomics! Read here: www.microbiologyresearch.org/content/jour...
As we leave late summer behind & enter autumn & some normality, we have been able to get together to celebrate some awesome achievements by our @stevenrudder.bsky.social & @eh-hayles.bsky.social. In a Langridge lab tradition, both received their coasters of their 1st author papers in the group!🎉🥳🎊
Waiting for the rain to stop? ⛈️ Need a good read? 📃 Our @eh-hayles.bsky.social has written a blog discussing her research exploring & understanding how SARS-CoV-2 spread & evolved in #Norfolk during the #COVID-19 pandemic 🦠 She shows the powers of #sequence surveillance & #epidemiology💪
How SARS-CoV-2 impacted Norfolk: What a three year study taught us - Quadram Institute
“In the five years since COVID-19 was declared a pandemic, we’ve learnt a lot – not just about the virus that causes COVID-19 (SARS-CoV-2) but also how to track the spread and evolution of microbes th...
quadram.ac.uk
I've written a blog discussing my recent published research into SARS-CoV-2 genomic epidemiology in Norfolk throughout the pandemic! Find it here: quadram.ac.uk/blogs/how-sa...
How SARS-CoV-2 impacted Norfolk: What a three year study taught us - Quadram Institute
“In the five years since COVID-19 was declared a pandemic, we’ve learnt a lot – not just about the virus that causes COVID-19 (SARS-CoV-2) but also how to track the spread and evolution of microbes th...
quadram.ac.uk
🆕 Blog! Our PhD student @eh-hayles.bsky.social discusses her research exploring and understanding how SARS-CoV-2 spread and evolved in #Norfolk during the COVID-19 pandemic 🦠 ➡️ buff.ly/YgTTNVG
Massive thank you to @yaasircheema.bsky.social for this great podcast about the paper!
Prefer to hear about the latest, awesome science in podcast summary instead of reading the entire paper? Our @eh-hayles.bsky.social's @microbiologysociety.org paper has already been turned into a podcast episode! Listen here or read the paper here www.microbiologyresearch.org/content/jour...
Prefer to hear about the latest, awesome science in podcast summary instead of reading the entire paper? Our @eh-hayles.bsky.social's @microbiologysociety.org paper has already been turned into a podcast episode! Listen here or read the paper here www.microbiologyresearch.org/content/jour...
Genomic epidemiology of SARS-CoV-2 in Norfolk, UK, March 2020–December 2022
ReSay · Episode
open.spotify.com
Genomic epidemiology of SARS-CoV-2 in Norfolk, UK, March 2020–December 2022
In the UK, the COVID-19 Genomics UK Consortium (COG-UK) established a real-time national genomic surveillance system during the COVID-19 pandemic, producing centralized data for monitoring severe acut...
doi.org
Key Highlights: • 401 SARS-CoV-2 lineages detected across the pandemic • 5 Variants of Concern IDed with Alpha, Delta & Omicron dominating • 4 distinct regional epidemic waves • Clear variation in wave patterns between different regions • 1st paper to ever come from @mmbdtp.bsky.social 🥳🧬 #PhDlife
Thrilled to share my first, first author paper is now published in MGen!! See more below ⬇️⬇️⬇️
Our @emmabeansworth.bsky.social will be presenting her latest work on the impact of genome rearrangement on #virulence & #AMR 💊 go see her at poster 102 Our @nisbetalice.bsky.social will closing the conference with the final talk looking at 20 years of #typhoidal Salmonella in England & Wales 🧫
Our @nisbetalice.bsky.social, @emmabeansworth.bsky.social & @gemma-langridge.bsky.social are having a magnifique time at #I3S. Currently they are enjoying talks in the #comparativegenomics session where Emma will also present her poster (102) showing genome rearrangement can impact #virulence & #AMR
Very grateful to have been invited to present my research on #SARS-CoV-2 genomic epidemiology in #Norfolk at the Norwich Health Innovation Conference today!
Find out about COVID genomic epidemiology in Norfolk with @eh-hayles.bsky.social at poster 7 🔍 at the Norwich Health Innovation Conference 2025 today! 🩺 Also be sure to find @nisbetalice.bsky.social at poster 2 to learn about the incidence and carriage of typhoidal Salmonella in England and Wales! 🦠
Excited to be back at #ABPHM25 in Cambridge this year! Lots of very insightful talks and demonstrations of #bioinformatics & #genomics and their use in public health.
Aww look at these trend setters in #microbiology! Interested in the large genome structural variation that isn't accounted for in short read #sequencing & consequences these have, read the latest review by our @emmabeansworth.bsky.social & @gemma-langridge.bsky.social #academicsky #academicchatter
Bacterial genome structural variation: prevalence, mechanisms, and consequences
A vast number of bacterial genome sequences are publicly available. However, the majority were generated using short-read sequencing, producing fragmented assemblies. Long-read sequencing can generate...
dlvr.it
🚨New publication🚨 Thrilled to share our article about the Importance of Diversity & Representation in Science, now out in npj Antimicrobials & Resistance @springernature.com Huge thanks to my wonderful co-authors @blancaps.bsky.social & @edcoakes.bsky.social for their awesome support
Importance of diversity and representation in science: benefits towards strengthening our response to global challenges
npj Antimicrobials and Resistance - Diversity is a mechanism that pathogens use to adapt and survive new challenges, like the introduction of antimicrobials in modern medicine. With antimicrobial...
rdcu.be
"The PIPS placement is a great opportunity to diversify your CV in whatever way you want.” 💬 PhD student Sam Mellor
Demystifying infectious intestinal disease; My PhD placement in food safety policy - Quadram Institute
PhD student Sam Mellor recently completed a placement at the Food Standards Agency, uncovering the burden of infectious intestinal disease in the UK.
buff.ly
Today I presented my PhD research at the Microbiology Society Annual Conference in Liverpool! Thanks so much to the Microbiology Society! @microbiologysociety.org
Fantastic talk from Caroline @quadraminstitute.bsky.social looking at how DNA supercoiling and genomic context affect gene expression #PhD #geneticsandgenomics #Microbio25
At #MicroBio25? Don't miss our @nisbetalice.bsky.social from @quadraminstitute.bsky.social at poster 301! 👩🔬 She's presenting her exciting research with @ukhsa.bsky.social on #typhoidal #Salmonella in England & Wales over to last 20 years, with some fascinating insights into bacterial carriage!🦠
Excellent @mmbdtp.bsky.social PhD project available with an excellent supervisory team ⬇️⬇️⬇️
Our @emmabeansworth.bsky.social & @gemma-langridge.bsky.social are part of this awesome #PhD opportunity with @benaevans.bsky.social. If you are at #Microbio25, interested in or know someone interested in doing a #PhD with some amazing #bioinformatic training alongside go talk to Gemma Please share