I have received the Excellence Prize in evolutionary biology in the @sbbe.bsky.social Conference for the second time in the field of Methods and Software. I am most grateful to my coauthors and especially to @sreinales.bsky.social for all her support in this academic and personal journey.
Gustavo A. Ballen
@gaballench.bsky.social
Computational biologist 🖥️. (Palaeo)Ichthyologist 🐟🦴. Lutenist 🎶. FAPESP postdoctoral fellow at UNESP Botucatu. https://gaballench.com
Fossil freshwater fishes from the Pliocene of northern Colombia & the palaeogeography of northern South America onlinelibrary.wiley.com/doi/10.1002/... @gaballench.bsky.social @sreinales.bsky.social @agenciafapesp.bsky.social #PapersinPalaeontology #FossilFriday
Applications for the 2027 summer school on Computational Molecular Evolution on Crete are now open at: meetings.embo.org/event/27-com...
And finally it was published! Massive thanks to my coauthors, the editor and reviewers, and the institutions that supported our research. journals.plos.org/plosone/arti...
What did the dove sing to Pope Gregory? Ancestral melody reconstruction in Gregorian chant using Bayesian phylogenetics
An attractive goal in the study of Gregorian chant melodies is reconstructing unobserved melodies as they may have been transmitted along their history, especially as early chant notation does not cap...
journals.plos.org
What did the dove sing to Pope Gregory? A thread on phylogenetics and cultural evolution featuring our new preprint with Jan Hajic jr. and Klára Mühlova (www.biorxiv.org/content/10.1...) and previous contributions to the field.
VIII Simposio Colombiano de Biología Evolutiva Bogotá, 23-25 de julio Inscripciones abiertas 📣 Diversidad de invitados, cursos precongreso y simposios temáticos: Biogeografía, filogenética, EvoDevo, morfometría, enseñanza de la evolución y mucho más... Más info: lasalle.edu.co/es/viii-simp...
Include fossils in your phylogenies whenever possible!
📢 Including fossil tips in your phylogeny can double your continuous trait model fitting accuracy! Updated preprint out now on @ecoevorxiv.bsky.social. 🔗 doi.org/10.32942/X27... with @pedrolgodoy.bsky.social @macroecoevoale.bsky.social and @bethanyjallen.bsky.social
RRrrrr, a scientist's best friend. A new package "tbea" has made estimating phylogenies even easier than before, crucial for testing hypotheses in evolutionary biology! Combining fossil, genetic & geological data, this study looked at S American Cynodontidea as an example 👇
tbea: tools for pre- and post-processing in Bayesian evolutionary analyses
Abstract. Estimating phylogenies in which branch lengths are expressed in units of absolute time is crucial for testing hypotheses in evolutionary biology.
doi.org
I'm happy to share our latest (and wrap-up) paper from the Genome of Melody project in this special collection on cultural evolution royalsocietypublishing.org/rstb/article...
Thank you to @palaeopercs.bsky.social for inviting me, the talk is already available on YouTube: youtu.be/k-yWOsyF0Jw
Gustavo A. Ballen - Palaeoichthyology and Neogene Palaeogeography of Northern South America
YouTube video by Pal(a)eoPERCS
youtu.be
This outreach talk from last year just came out. Huge thanks to Claudia Solis-Lemus for inviting me to El Zoominario. www.youtube.com/watch?v=9qdL...
El Zoominario: How do we tell the time of macroevolution? -- Gustavo Ballen
YouTube video by SolisLemus-lab
youtube.com
eu quero SITES das coisas, com contato via e-mail e telefone, especialmente lojas, serviços etc e não perfil de Instagram com preço inbox also quero tutoriais e análises em escrito, que eu possa dar um control f, não em video que tu fica caçando o trecho de 5 segundos que te interessa
i don't want to hear your most boomer complaint. what's your most millennial complaint?
Our paper (with @sreinales.bsky.social) finally out today in the Evolutionary Journal of the Linnean Society. It feels like a birthday present 🤪 academic.oup.com/evolinnean/a...
tbea: tools for pre- and post-processing in bayesian evolutionary analyses
Abstract. Estimating phylogenies in which branch lengths are expressed in units of absolute time is crucial for testing hypotheses in evolutionary biology.
academic.oup.com
Our latest paper on Farlowella from Colombia in Journal of Fish Biology, the result of the undergrad dissertation by my former student Omar Melo. Supported by @agenciafapesp.bsky.social Universidad Javeriana, Museu de Zoologia da USP, and UNESP Botucatu. onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com
Phylogenetic networks empower biodiversity research | PNAS www.pnas.org/doi/10.1073/...
Phylogenetic networks empower biodiversity research | PNAS
Reticulate evolution has long been recognized as a key mechanism that contributes to genetic and trait diversity. With the widespread availability ...
pnas.org
Colombian palaeontology
Well, this came out today. Terror birds (Phorusrhacidae)were not friends, but food. Bueno, hoy salió esto. Las aves del terror (Phorusrhacidae) no eran amigos, sino comida. #PaleoSky #Phorusrhacidae #Paleontology #Fossils royalsocietypublishing.org/doi/10.1098/...
Multifaceted evolution of dental morphology during the diversification of the bat superfamily Noctilionoidea https://www.biorxiv.org/content/10.1101/2025.06.10.658888v1
The tragic landslide in Blatten gives me the excuse to tell you the story of how we found out Ice Ages existed. It's a cool story and the most important bit is rather similar to what's happening now.
Aerial view westward over the Blatten deposit and the newly formed lake upstream! 🧊🌊 📷Via Christian Petit/Linkedin
“Massive numbers of students are going to emerge from university with degrees, and into the workforce, who are essentially illiterate…Both in the literal sense and in the sense of being historically illiterate and having no knowledge of their own culture, much less anyone else’s.”
Everyone Is Cheating Their Way Through College
ChatGPT has unraveled the entire academic project.
nymag.com
Happy to share that my PhD paper published in Systematic Biology. My paper explores the #Asymptotictheory of Bayesian rate model selection and explore how misspecified calibrations can affect this. Also test rate model selection with large #Phylogenomes Link below: academic.oup.com/sysbio/advan...
Bayesian Selection of Relaxed-Clock Models: Distinguishing between Independent and Autocorrelated Rates
Abstract. In Bayesian molecular-clock dating of species divergences, rate models are used to construct the prior on the molecular evolutionary rates for br
academic.oup.com
I'm happy to see my latest preprint out on stratigraphic intervals, a topic I've been interested in since my first year as PhD student. Available in the brand-new StratIntervals.jl (github.com/gaballench/S...) @julialang.org package. Preprint on @biorxiv-evobio.bsky.social doi.org/10.1101/2025...
A flexible Bayesian method for estimating stratigraphic intervals and their co-occurrence in time https://www.biorxiv.org/content/10.1101/2025.02.13.638199v1
I'm happy to share our latest preprint on fossil fishes from Colombia, which represents the last piece of my PhD thesis that was still to be published. www.biorxiv.org/content/10.1... @agenciafapesp.bsky.social @uspoficial.bsky.social @sbbe.bsky.social #cienciacriolla
Fossil Freshwater Fishes from the Pliocene of northern Colombia and the Palaeogeography of northern South America
Freshwater fishes from northern Colombia are reported from the Sincelejo and Ware formations, of Pliocene age. A total of ten taxa have been identified comprising two orders, five families, and nine g...
biorxiv.org
Fossil Freshwater Fishes from the Pliocene of northern Colombia and the Palaeogeography of northern South America https://www.biorxiv.org/content/10.1101/2024.12.18.629252v1
Honoured to have won the prize to best presentation in methods and software at the Congresso Brasileiro de Biologia Evolutiva
Very excited to see the dissertation of my first undergrad student already available as a preprint (and submitted as well).
The taxonomic status of Farlowella colombiensis Retzer & Page 1997 with comments on species of the F. acus species group (Loricariidae: Loricariinae). https://www.biorxiv.org/content/10.1101/2024.11.18.624099v1