Last weekend, our group had a summer barbecue at Guangbin’s place to welcome our new members! Thanks to Guangbin for hosting, Liyan and Kangmin for organizing, and Qi, Shengkun, Xiaohan, and everyone else who helped with the cooking. We all had a great time!
Dong Group at UChicago
@gbdlab.bsky.social
Student-run twitter account for the Dong Lab at the University of Chicago Web Page: https://voices.uchicago.edu/donggroup/
Check out our new Account in Accounts of Chemical Research! We summarize our work on Pd/NBE-catalyzed vicinal difunctionalization of heteroarenes via double C–H activation—from catalyst design and mechanism to total synthesis. pubs.acs.org/doi/10.1021/...
Functionalization of Heteroarenes via Palladium/Norbornene-Catalyzed Double C–H Activation
ConspectusElectron-rich five-membered heteroarenes, such as pyrroles, furans, indoles, and thiophenes, are prevalent in small-molecule drugs and other functional organic compounds. Consequently, methods that enable rapid and modular construction of densely substituted heteroaromatic frameworks are of high importance. From the synthetic efficiency standpoint, direct introduction of two or more functional groups into heteroarene cores would greatly increase complexity, facilitate structural diversification, and streamline preparation of target compounds. Direct C–H functionalization has emerged as one of the most step-economical strategies for synthesis of complex aromatic compounds. Despite that substantial progress has been achieved in site-selective functionalization of C–H bond at a single position, the regio- and site-selective installation of two distinct carbon substituents at adjacent positions remains a formidable challenge. On the other hand, palladium/norbornene (Pd/NBE) cooperative catalysis has emerged as a powerful platform for vicinal difunctionalization of arenes. The classical Pd/NBE reactions use aryl halides as substrates, which are initiated by Pd(0)-mediated oxidative addition. Recently, the Pd(II)-initiated variants triggered by C–H palladation offer unique advantages of employing less functionalized substrates and accommodating milder operational conditions. However, application of the Pd/NBE catalysis to the double C–H functionalization of electron-rich five-membered heteroarenes has not been a trivial task, due to competing heteroatom coordination, substrate sensitivity under oxidative conditions, and undesired side reactions such as ipso protonation. In this Account, we provide a concise summary of our systematic efforts in developing the Pd/NBE-catalyzed vicinal difunctionalization of diverse heteroarenes via double C–H activation in the past six years. Depending on the general catalytic mechanism, these reactions can be classified into “oxidative” and “redox-neutral” difunctionalization reactions. We will focus on describing the reaction scope, the proposed mechanism, the product selectivity, and current limitations of these reactions. In particular, we will discuss the design and use of structurally modified NBEs that enable these transformations, as well as the mechanistic insights into their roles in controlling reactivity and selectivity. The major topics covered include: (1) oxidative C2,C3-difunctionalization of thiophenes and furans, which are enabled by C2-amide-substituted NBEs; (2) oxidative C2,C3-difunctionalization of indoles, enabled by C1-substituted NBEs; (3) oxidative C2,C3-difunctionalization of pyrroles and its application to the total synthesis of leuconoxine-type alkaloids; and (4) redox-neutral C2,C3-difunctionalization of pyrroles, thiophenes, and furans. It is anticipated that this Account could offer a clear overview on the state of art in the field of the Pd/NBE-catalyzed difunctionalization of heteroarenes. Additionally, the scope and limitations outlined here would provide guidance to readers for choosing suitable conditions when using these reactions. Moreover, the mechanistic insights gained in these studies may have valuable implications for developing more general difunctionalization reactions via double C–H activation.
pubs.acs.org
Our work on NAHA-enabled carbonyl removal of cyclic ketones is now published in @jacs.acspublications.org ! Congratulations to Zining! pubs.acs.org/doi/10.1021/...
pubs.acs.org
Check out our new preprint on @chemrxiv.org v with Peng Liu group! We developed an Ir-catalyzed, redox-neutral decarboxylative aromatization of carboxylated cyclohexanes. The carboxylic acid serves as a traceless anchor that enables good chemoselectivity. chemrxiv.org/doi/full/10....
Catalytic redox-neutral decarboxylative aromatization via transfer dehydrogenation | ChemRxiv
Arenes are fundamental structural motifs in organic molecules; therefore, methods for introducing aromatic rings are of broad importance. Traditional approaches that install arenes early followed by postfunctionalization often struggle to achieve diverse ...
chemrxiv.org
Check out our recent work on @angewandtechemie.bsky.social ! We developed a transition-metal-free “cut-and-sew” reaction that formally inserts five-membered heteroarynes into benzocyclobutenones, providing access to fused heteropolycycles. Congrats to Cole! onlinelibrary.wiley.com/doi/10.1002/...
Transition Metal‐Free Heteroarene Insertion Into C─C Bonds of Benzocyclobutenones
A transition metal-free insertion of five-membered heteroarenes into the C─C bonds of benzocyclobutenones has been achieved under mild and operationally simple conditions. This method provides an eff...
onlinelibrary.wiley.com
Last week, Sohee successfully defended her PhD—congratulations! From the total synthesis of harziane diterpenoids in Snyder group to exploring NAHA chemistry with us over the past two years, what an impressive scientific journey. Wishing her all the best in her next chapter!
Check out our recent work on @chemrxiv.org : using our NAHA reagent, now we are able to remove the carbonyl group from cyclic ketones--through both reductive and annulative pathways! chemrxiv.org/doi/full/10....
Last week, several undergraduate students from our group completed their honors thesis defenses. Congratulations to Celeste, Justin, Melody, and Kayla on this milestone! We are so proud of your hard work and wish you all the best in your next chapter!
Check out our latest work on @jacs.acspublications.org : a ligand-controlled enantioconvergent homologation enables efficient access to chiral tertiary alkyl boronates. Congratulations to Miao, @ankizxu.bsky.social and Coco! pubs.acs.org/doi/10.1021/...
Asymmetric Synthesis of Tertiary Alkyl Boronates via Ligand-Controlled Enantioconvergent Homologation
Tertiary alkyl boronates are highly versatile synthetic intermediates; however, their asymmetric preparation remains challenging and exhibits limitations. Here we report a distinct ligand-controlled strategy for the synthesis of chiral tertiary alkyl boronates via enantioconvergent homologation with racemic tertiary α-thio lithium carbenoids. The enantioselectivity in this process is controlled by chiral hydrobenzoin-derived diether ligands. Both aryl and alkyl boronates give high yield and excellent enantioselectivity (up to >99:1 e.r.), showing good functional group tolerance. Mechanistic studies support an unusual pathway involving ligand-mediated dynamic thermodynamic resolution of racemic carbenoids, followed by rapid ate-complex formation and an indium-mediated stereospecific 1,2-migration. The utility of this strategy is demonstrated in the asymmetric construction of various fully substituted stereocenters and concise modular syntheses of precursors for muscarinic M3 receptor antagonists.
pubs.acs.org
Last week, Cole successfully defended his PhD! He will be starting his postdoc at Northwestern University. Congratulations, Dr. Wagner! Wishing you all the best in the future!
It's EDITING day in @science.org chemsky which is exciting because I'm an editor🙃 Anyway we have three different papers on skeletal editing!
Our recent work on aliphatic CO-to-N atom swap enabled by NAHA chemistry, now online in @science.org ! Congratulations to Zining, Zhehan and Rong! www.science.org/doi/10.1126/...
Scanning nitrogen in sp3-rich scaffolds enabled by carbonyl-to-nitrogen atom swap
Medicinal chemistry campaigns routinely require access to series of saturated nitrogen heterocycle (SNH)–based analogs that place nitrogen at different positions to probe structure-activity relationsh...
science.org
Check out our recent work on unstrained C–C activation! We report a site-selective C-demethylation of phenols and anilines enabled by a removable mono-directing group. Congrats to Yibin, Liyan, Linda, and Congjun @congjunyu.bsky.social ! pubs.acs.org/doi/full/10....
Catalytic C-Demethylation of Phenols and Anilines Enabled by a Removable Mono-Directing Group
The activation of unstrained nonpolar C–C bonds, such as C(aryl)–C(alkyl) bonds, remains challenging to achieve. Existing catalytic strategies predominantly rely on bidentate chelating directing groups (DGs) or special substrates. Herein, we report a Ru-catalyzed activation of C(aryl)–C(methyl) bonds enabled by a removable mono-DG. By employing a bulky phosphinite or aminophosphine-DG that can be easily installed and removed later, a methyl group at the ortho position of phenols and anilines can be smoothly deleted under the hydrogenolysis condition. This reaction exhibits a broad substrate scope and excellent functional group tolerance. Mechanistic studies suggest that a Ru–hydride species generated in situ is responsible for the C(aryl)–C(methyl) bond activation, with methane identified as a byproduct.
pubs.acs.org
Check out our recent work on aliphatic C-to-N atom swap enabled by NAHA chemistry! This strategy enables access to diverse saturated N-heterocycles from cyclic ketones or cyclic alkanes. See: chemrxiv.org/engage/chemr...
This weekend, we had a wonderful Christmas & New Year party with our group! Many thanks to Guangbin for hosting and bringing everyone together. Wishing the Dong group a joyful holiday season and a great year ahead!
Thrilled to see our recent Nature Chemistry work featured in @cenmag.bsky.social ! Big thanks to @bribarbu.bsky.social for the great coverage!
These shape-shifting rings create customizable cores
1,2-oxaborines can shift into 11 different ring shapes to make modifying molecular cores easy
cen.acs.org
Check out our latest work in Nat. Chem. @natchem.nature.com ! We developed a platform using 1,2-oxaborines to construct a broad range of aromatic and non-aromatic cores from common enone/enal precursors. Congratulations to Yao and the team! Read here: rdcu.be/eJ90T
Core diversification using 1,2-oxaborines as a versatile molecular platform
Nature Chemistry - In drug discovery, the preparation of analogues with diverse core structures often requires laborious efforts. Now it has been shown that 1,2-oxaborines, which are synthesized...
rdcu.be
Developed by Liyan and Rui, we expand our cut-and-sew chemistry to β-lactams, enabling access to diverse bridged & fused N-heterocycles. Now online in @jacs.acspublications.org ! Congratulations to the team! pubs.acs.org/doi/full/10....
“Cut-and-Sew” Reactions of β-Lactams via C–C Bond Activation
Transition metal-catalyzed “cut-and-sew” reactions offer an efficient approach to construct bridged and fused scaffolds; however, the substrates have been primarily restricted to cyclic ketones and ac...
pubs.acs.org
Check out our recent Nature Catalysis@natcatal.nature.com work on ruthenium-catalysed site-selective arene saturation—turning flat arenes into 3D sp³ frameworks! 👏Congrats to Congjun@congjun.bsky.social and the team! Read here: rdcu.be/eCQQB
Site-selective Ru-catalysed saturation of unactivated arenes via directed 6π activation
Nature Catalysis - Directing group strategies for selective dearomatization of unactivated aromatic π-systems have remained elusive. Now a homogeneous ruthenium catalyst, aided by a removable...
rdcu.be
Our latest achievement is now online in Tetrahedron Letters, published as part of a special issue honoring Prof. Song Lin @songlin1.bsky.social for receiving the Tetrahedron Young Investigator Award. sciencedirect.com/science/arti... Congratulations to Xin and all co-authors!
Advances in vicinal dicarbo-C–H-functionalization of five-membered heteroarenes via palladium/norbornene cooperative catalysis
Direct introduction of two carbon substituents to less functionalized aromatic cores has been an attractive objective for late-stage modification and …
sciencedirect.com
Last weekend, we had a wonderful farewell party for Congjun and Miao at Guangbin's house. Congjun will join UC Boulder as a tenure-track Assistant Professor, and Miao will be starting at Merck as a Senior Scientist. Wishing them both the best of luck!
Proud to add one more reagent to EROS! In this article, we summarized the synthesis and application of the N-methylbicyclo[2.2.1]hept-2-ene-2-carboxamide, a co-catalyst in the palladium/norbornene cooperative catalysis. Congrats to Dr. Shinyoung Choi! onlinelibrary.wiley.com/doi/10.1002/...
N‐methylbicyclo[2.2.1]hept‐2‐ene‐2‐carboxamide
[2394994-09-1] C9H13NO (MW 151.21) InChI = 1S/C9H13NO/c1-10-9(11)8-5-6-2-3-7(8)4-6/h5-7H,2-4H2,1H3,(H,10,11) InChIKey = BYXAMVZFVXOYIF-UHFFFAOYSA-N (reagent used as a co-catalyst...
onlinelibrary.wiley.com
🔥 Scalable achievement in enantioselective homologation. 🔥 Our work on "Enantioconvergent carbenoid insertion into carbon−boron bonds" is now online on Nature Synthesis rdcu.be/etopg 🎉Congratulations to Qiqiang! 🙏Thanks to our collaborator Liu group
Enantioconvergent carbenoid insertion into carbon–boron bonds
Nature Synthesis - An enantioconvergent approach for direct asymmetric insertion of racemic carbon-, oxygen-, nitrogen-, sulfur- and silicon-substituted carbenoids into carbon–boron bonds is...
rdcu.be
🚀New advance toward asymmetric α‑Alkylation of Aldehydes. ✨Lead by Kezhi, we report a branched-selective α-alkylation of aldehydes with unactivated olefins — enabled by a pyrazole mediator and a chiral Ir catalyst. Congrats! pubs.acs.org/doi/full/10....
Toward Iridium-Catalyzed Asymmetric Branched-Selective α-Alkylation of Aldehydes with Unactivated Alkenes Enabled by a Pyrazole Mediator
Aldehyde α-alkylation remains a challenging transformation. On the other hand, given the wide availability of alkenes, it has been an attractive objective to use unactivated alkenes as alkylating agen...
pubs.acs.org
🚨Just out in Nature! We have offered a general method for 1,2-difunctionlization of arenes via a differential 1,2-diborylation! rdcu.be/esXq8 www.nature.com/articles/s41... Congratulations to Jingfeng!
How do you turn a carbonyl into sulfur? In this work, Zining from our lab developed a carbonyl-to-sulfur swap enabled by a rationally designed N′-alkyl-hydrazonamide (NAHA) reagent that promotes double C-C bond activation. www.science.org/doi/10.1126/...
Out First Release in @science.org today, Zining Zhang in @donglab.bsky.social swaps out ketones for sulfur in saturated carbon rings through two modes of radical trapping www.science.org/doi/10.1126/...
Carbonyl-to-sulfur swap enabled by sequential double carbon-carbon bond activation
In drug development, replacement of a skeletal carbon with a sulfur atom can result in analogs of bioactive compounds with improved properties. Currently, the sulfur analogs are almost exclusively pre...
science.org
Thrilled to share our latest achievement in C-C activation: Downsizing lactams via Rh-catalyzed C-C activation. www.sciencedirect.com/science/arti... Congratulations to Rui and Kangmin!
Downsizing lactams via Rh-catalyzed C–C activation
Ring-contraction reactions are valuable transformations to access harder-to-synthesize smaller-sized rings from more-available larger-sized precursors…
sciencedirect.com
So excited to share a new achievement by Zining and Kezhi in collaboration with Prof. Peng Liu!!! We developed a Cu-mediated deacylative fluorination approach that can convert a wide range of methyl ketones to the corresponding alkyl fluorides. pubs.acs.org/doi/full/10....
Alkyl Fluoride Synthesis via Cu-Mediated Deacetylative Fluorination
Given the increasing demand for diverse alkyl fluorides for various applications, it would be beneficial to enrich the fluorination toolbox by including more kinds of common functional groups, such as ketones, as fluoride surrogates. Here we report a Cu-mediated deacylative fluorination approach that can convert a wide range of methyl ketones to the corresponding alkyl fluorides. The reaction is enabled by a ketone activation reagent and a nucleophilic fluoride source. It features broad functional group tolerance, capability for the late-stage fluorination, fluoro-annulation, synthesis of α,α-dideuterated fluorides, and degree-controlled synthesis of mono-, di-, and trifluoro alkanes from a single ketone starting material. The computational studies suggest interesting Cu(III)-mediated C–F bond forming pathways via either fluorine atom transfer or an SN2 process.
pubs.acs.org
Please check out our recent outlook written by Miao: Atom-by-Atom Iterative Synthetic Logic: Laying the Foundation for Programmable Automated Construction of Small Organic Molecules | ACS Central Science pubs.acs.org/doi/10.1021/...
Atom-by-Atom Iterative Synthetic Logic: Laying the Foundation for Programmable Automated Construction of Small Organic Molecules
Fully automated preparation of diverse small organic molecules remains a formidable challenge due to the inherent constraints of conventional synthetic philosophies. The existing automation approaches require access to either almost unlimited kinds of chemical reagents or custom-made building blocks (BBs). Herein we propose atom-by-atom iterative synthesis (AIS) as a new synthetic logic to tackle this challenge. By viewing complex organic molecules as assemblies of single-carbon- or heteroatom-based units, AIS aims to construct molecular skeletons through iterative coupling of simple atomic-scale BBs by a unified type of reaction─boron homologations. Compared with conventional approaches, the AIS strategy uses only a few types of chemical reactions and a small set of BBs, making it more suitable for automation and artificial intelligence-assisted synthetic route design. To date, enormous progresses have been made on the synthetic chemistry that serves for the purpose of AIS, such as introducing heteroatoms and sp2-carbons, forming ring structures, developing thermostable carbenoid reagents, and achieving stereochemical controls. On the other hand, substantial challenges and limitations remain to be overcome for realizing fully automated construction of diverse molecules. This Outlook article describes the AIS concept, recent progress, current limitations, and future opportunities in this field.
pubs.acs.org