@genomicscow.bsky.social

Original and probably disagreeable perspectives on genomics. Not sure when I'm joking and when I'm being serious. Opinions my own, not the herd’s.

Conferences yesterday: folks on their phone doing emails or social Conferences today: folks on their phones checking chat AIs to figure out what the speaker is going on about 🐮

The unspoken beneficiaries of Chat GPT are the newly brought-in CEOs and other senior managers to a company where they can’t be seen to ask the dumb questions on the technology or biology 🐮

NovaSeq X 1.4 software upgrades customer priority lists are the new way Illumina can treat its premium customers now that they are trying to be more disciplined with discounting 🫠

Lots of new genomics product announcements! 🚨 Sales/marketing promoting on LinkedIn these products they sell. Ho hum. Recruiters promoting on LinkedIn these products from companies they want to recruit for. Cringe?

Like in politics, the middle powers of genomics might need to band together a bit more Middle power companies are those could get bought by the super powers (Illumina, Thermo, Danaher, etc) If they don’t meet in Davos they should at least meet in Orlando

What took Xenium so long to get protein panels out? These were touted several years ago - Resources taken from Xenium? - Resources in Xenium but needed for other features or bugs to fix? - Chemistry was poorly optimized for dev teams to finalized? But one answer can’t be true: lack of demand.

Company posting message about how important their products are …and backing this up with a picture of their Chief-anything-Officer with a quote about how much we should believe this #imsold! 🐮

Imagine if people were honest on LinkedIn: Instead of congratulating someone on their new role, “This person burned their bridges” Till then, LinkedIn is just one big self-advertising platform 🐮

You can’t eat microchips. Social media can’t heal the sick. B2B SaaS will never love you The final measure of any technology is the value it creates, directly or indirectly, for living things. In this sense, biology is everyone’s mission

Excited and bearish on proteomics risk scores. I hear how they compare favorably to polygenic risk scores But, polygenic risk scores already perform far better than incumbents Performance isn’t the issue To be clear, proteins have many advantages (dynamic, possible with existing dx infrastructure

Last I read of Vinay Prasad he was generally against large genomics panels for cancer testing - though with reasonable rebuttals Wow his career really took a turn (and off!) from those days!

Companies have been letting go a lot of staff recently But the firing of Kári Stefánsson from decode in Iceland really sticks out Sounds like Amgen couldn’t be too endless with the popgen programs

“Are you still interested in genomics?” Illumina just sent this to me, giving uninterested ppl a chance to unsubscribe Appreciate the politeness but it’s timing reinforces meekness

Assemble a polygenic risk score for a trait and get an AUC of 0.75 Add some dynamic ‘ome like RNA, methylation or protein and get that number to 0.8+ This hypothetical is a significant improvement but who’s gonna afford 2+ omics to validate your combinatorial signature?