markus
@ibio.dev
Computer Scientist with a passion for bioinformatics 💻🧬🧑🔬🧪. Postdoc Integrative Bioinformatics @LMU_Munich. Combining Networks and Single Cells.
Bitte am Sonntag wählen gehen! Noch nie war eine Wahl so wichtig für Deutschlands Zukunft. #Btw2025
in case this is useful to someone in this massive platform migration: a starting pack for single-cell omics computational methods go.bsky.app/GmS1cH
single-cell computational methods
Join the conversation
go.bsky.app
Heute mal auf @lokfuehrer-tim.bsky.social seiner Lieblingslinie unterwegs. Soweit so gut, jetzt vor Deutz staut es sich....
Announcing the Ascona Workshop “Spatial and Temporal Statistical Modeling in Molecular Biology” in Ascona CH, 8-13 Sep 2024. Statistical, computational& ML methods& appln's for spatial biological data, from nucleus, spatial omics of tissues to ecosystems & planetary-scale biology spatialbio.net
The nice part of commuting to university by local train (in Germany) is: you have enough time to think about your research, the next steps within a project, and how you can tackle existing challenges. And all of that, because coverage is so unreliable that you are not even distracted by Emails!
Coining a new acronym for researchers: STUPID — Studying Topics Uninformed by Prior Investigations in the Discipline. Applies broadly.
10X Genomics just made the source for CellRanger available (but not open source); github.com/10XGenomics/...! While I strongly advocate for using truly open tools for sc preprocessing e.g. github.com/COMBINE-lab/..., this is still a huge win for computational transparency in single cell analysis! 🖥️🧬
GitHub - COMBINE-lab/simpleaf: A rust framework to make using alevin-fry even simpler
A rust framework to make using alevin-fry even simpler - GitHub - COMBINE-lab/simpleaf: A rust framework to make using alevin-fry even simpler
github.com
Not enough people know about bioicons.com Open source vector graphics. Free alternatives to BioRender.
The advantage of travelling by train to university in southern Germany - Nice view of the Allgäu and the Alps 🤗
Everyone keep this handy for those faculty meetings where your colleagues say the students aren't what they used to be. @aaronclauset.bsky.social www.science.org/doi/10.1126/...
Science | AAAS
science.org