What if you could ask: "How would this cell respond to a drug dose that was never tested, in a patient who was never enrolled?" TarDis decomposes reality — separating age, disease, dosage, and context into independent axes, so you can reconstruct conditions that don't yet exist.

We just released IDTrack: a reproducibility layer for gene and transcript identifiers. Integrating across tools, databases, and annotation releases is brittle because identifiers drift over time (renames, merges, splits, deprecations), often without any visible warning.

Thrilled to announce the launch of my most significant and promising collaboration to date—a lifelong partnership! 💍 Together, we’ll be co-authoring every chapter ahead, optimizing for shared happiness, resilience, and intellectual curiosity. Looking forward to this interdisciplinary journey. 🥂

Excited to announce that our latest work “Beyond Visual Inspection: Principled Benchmarking of Single-Cell Trajectory Representations with scTRAM” has been accepted to the ICML GenBio workshop, July 13–19 in Vancouver, Canada. 🇨🇦🧬✨ biorxiv.org/content/10.1... #icml2025 @icmlconf.bsky.social

Beyond Visual Inspection: Principled Benchmarking of Single-Cell Trajectory Representations with scTRAM

Single-cell representation learning aims to construct low-dimensional embeddings that preserve biologically salient manifold structures. Yet current evaluation protocols remain inadequate for assessin...

biorxiv.org

Couldn’t have asked for a better experience at #RECOMB2025. Thank you for the Best Student Paper / Young Scientist Award 🏆— and for all the inspiring conversations and warm moments. Special thanks to my PI, @fabiantheis.bsky.social for his guidance and support. Feeling excited for what comes next! 🧬

In Seoul for #RECOMB2025: presented TarDis, exchanged ideas, and found comfort in good conversations and even better kimchi. 🧬👨🏻‍💻🇰🇷🍜

RECOMB has officially started! 👨🏻‍💻🧬 Super excited for the talks, the people, and all the science ahead. Already fueled up with some incredible Korean food 🇰🇷🍜. Honestly, if the conference is half as good as the food, it’s going to be unforgettable. #recomb @recombconf.bsky.social