Next week at our weekly 9AM PST Tuesday meeting, we will introduce a migration of our data release paper to Myst. Try out the draft demo: allenneuraldynamics.github.io/openscope_p3... Meeting open to all : allenneuraldynamics.github.io/openscope-co...

OpenScope Predictive Processing Community Project - Data Release - OpenScope Predictive Processing Community Project - Data Release

allenneuraldynamics.github.io

OpenScope is an open platform for community-designed, high-throughput neurophysiology. Researchers propose questions; our team runs standardized experiments and releases the resulting data openly. Learn more: www.allenneuraldynamics.org/projects/ope...

OpenScope | Allen Institute for Neural Dynamics

OpenScope provides access to cutting-edge neurophysiological methods to scientists across the world. Similar to astronomical observatories, scientists propose experiments that are then executed at the...

allenneuraldynamics.org

What I learned using Claude Science and more complex AI agentic workflows in Science. www.linkedin.com/pulse/comput...

Computational Reviews: building AI agentic workflows that doubt

The need for long-form scientific reviews Long-form reviews are some of the most useful documents in science. Every review I have contributed to has considerably helped me connect disparate pieces of ...

linkedin.com

Our weekly meeting recording with some "off the press" analysis of Zebra movies by Marcel Raabe. www.youtube.com/watch?v=nA3y... Lots of receptive fields in our Neuropixels data!

Predictive Processing Community Project Weekly Meeting - 6/16/2026

YouTube video by OpenScope - Allen Institute for Neural Dynamics

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Tomorrow, our 9AM PST session for the OpenScope predictive processing community project will be dedicated to the analysis of mesoscope two photon data. Nicholas Rodriguez will present some of his latest analysis. allenneuraldynamics.github.io/openscope-co... Open to all!

Have you ever been in an authorship conflict on an academic paper? You're not alone. This thread is for you.

Tomorrow (9AM PST) at the weekly OpenScope predictive processing meeting, we will have a presentation on synaptic imaging pilot data analysis. As usual details are available here : allenneuraldynamics.github.io/openscope-co... Open to all!

Tomorrow, usual 9AM PST meeting for the OpenScope predictive processing project: allenneuraldynamics.github.io/openscope-co... Discussion on the quantification of the mesoscope region of interests (ROI) for the data release paper. Open to all!

As promised, the OpenScope predictive processing community data keeps pouring in. 2 weeks ago, it was the raw data (all files). This week: 40 complete NWBs for our Neuropixels ecephys. 45 complete NWBs Mesoscope sessions. github.com/AllenNeuralD... More is coming.

AllenNeuralDynamics openscope-community-predictive-processing · Discussions

Explore the GitHub Discussions forum for AllenNeuralDynamics openscope-community-predictive-processing. Discuss code, ask questions & collaborate with the developer community.

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Tomorrow, April 21 9AM PST, for our weekly predictive processing meeting, we will discuss coordination of data analysis for the data release paper. Meeting page: allenneuraldynamics.github.io/openscope-co... Open to all.

Exactly one year after sharing this gigantic review arxiv.org/abs/2504.09614, we just shared 56TB of data with the world: Entirely new experiments described in the review. And more is coming...

Neural mechanisms of predictive processing: a collaborative community experiment through the OpenScope program

This review synthesizes advances in predictive processing within the sensory cortex. Predictive processing theorizes that the brain continuously predicts sensory inputs, refining neuronal responses by...

arxiv.org

Tomorrow, 9AM PST, at our OpenScope community project meeting on predictive processing, Carter Peene will provide an in-depth introduction to our currently available datasets on S3 Meeting invite and agenda : allenneuraldynamics.github.io/openscope-co... Open to all!

Next Tuesday April 7th 9AM PST, at our community meeting on predictive processing, Pavithra Rajeswaran, Bodhisattwa Majumder, from AI2, will introduce asta.allen.ai and its potential for AI-assisted discoveries. Open to all! allenneuraldynamics.github.io/openscope-co...

We just posted a big update of our community review on predictive processing. All figures were redone for consistency and clarity. arxiv.org/abs/2504.09614 Experiments designed and described in the review are ongoing and will be done and shared with the community by late spring.

Neural mechanisms of predictive processing: a collaborative community experiment through the OpenScope program

This review synthesizes advances in predictive processing within the sensory cortex. Predictive processing theorizes that the brain continuously predicts sensory inputs, refining neuronal responses by...

arxiv.org

Next Tuesday, for our predictive processing meeting at 9AM PST, we will continue shaping the data release paper. Please feel free to join to contribute. allenneuraldynamics.github.io/openscope-co... Open to all!

Tomorrow, 9AM PST, as agreed last week, we will discuss the content of the data release paper for the OpenScope predictive processing community project. As usual, our meeting agenda is here : allenneuraldynamics.github.io/openscope-co... Open to all.

Tomorrow at 9AM PST, as part of our weekly community meeting on predictive processing, we will discuss the analysis plan that will follow the data collection phase. As usual here is our meeting agenda along with meeting links : allenneuraldynamics.github.io/openscope-co...

OpenScope Predictive Coding Analysis Map: draft stage1 for an (interactive?) navigator for multi-session neural data analysis · AllenNeuralDynamics openscope-community-predictive-processing · Discussi...

I drafted an analysis map as a visual companion to the analysis outlines described in the preprint. The map organises the planned analyses across the experimental paradigms focusing on mismatch res...

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Tomorrow, at 8AM PST, we will introduce the data release of 4 OpenScope projects that were simultaneously acquired in 2024: Psilocybin, texture discrimination, long-term memory, and motion perception. OpenScope continues to grow, step by step. Join us: docs.google.com/document/d/e...

Next week, on March 4th starting at 8AM PST, we will host our annual OpenScope data release webinar. 4 OpenScope projects on psilocybin, texture discrimination, long-term visual memory, and motion perception in mice! You can find the program here : docs.google.com/document/d/e...

Tomorrow, 9AM PST, as part of weekly meeting for the OpenScope community project on predictive processing, we will discuss : - Quick review of updated figure 2 - Ongoing experimental sheet - Planning around shared analysis Open to all on Microsoft teams! To join: lnkd.in/gvwn-VY6

Tomorrow, 9AM PST, for our regular meeting for the OpenScope community project on predictive processing, we will discuss an update to our Figure 2 on the publication on arXiv. Meeting link and agenda : allenneuraldynamics.github.io/openscope-co... Open to all!

Dear all, Tomorrow, Feb 10 9AM PST, we will discuss figures update for our community review. As usual, you can find our meeting agenda and links here : allenneuraldynamics.github.io/openscope-co... As well as the meeting material and discussion here : github.com/AllenNeuralD... Open to all!

My weekly appointment with the Sun.

Tomorrow, at 9AM PST, as part of our regular meeting for the community project on predictive processing, John Meng will present his work on "Duet model". Open to all ! allenneuraldynamics.github.io/openscope-co...

Tomorrow, we will meet as usual at 9AM PST time. Our meeting agenda is here : allenneuraldynamics.github.io/openscope-co... Note that the schedule has been updated to dedicate the session to the analysis of receptive fields in pilots. The presentation from John Meng has been moved to January 20.

Here is our recording from this week OpenScope community meeting on predictive processing. www.youtube.com/watch?v=qDb-... Unfortunately, we lost the very beginning due to some technical issues. We apologize for that.

Predictive Processing Community Project - Weekly meeting 01/06/26

YouTube video by OpenScope - Allen Institute for Neural Dynamics

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Our week long atmospheric river ended on a Saturday in Seattle, making this view even more enjoyable.

As usual, here is our meeting recording : www.youtube.com/watch?v=K7W-... Exciting session with tons of data-driven discussion led by Ali Shamsnia on weeks old Neuropixels data.

Predictive Processing Community Project - Weekly meeting 12/09/25

YouTube video by OpenScope - Allen Institute for Neural Dynamics

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Tomorrow, at 9AM PST, for our regular meeting for the OpenScope Predictive Processing community project, we will have a presentation on Neuropixels pilot data analysis led by Ali Shamsnia from Farzaneh Najafi's laboratory. Open to all: allenneuraldynamics.github.io/openscope-co...

Weekly sunset run in San Francisco !