Joe Thornton

@joethorntonlab.bsky.social

Evolutionary biochemistry at UChicago. Reconstructing ancient proteins.

New paper from the lab from Sriram Garg in my group. We introduce a general substitution matrix for structural phylogenetics. I think this is a big deal, so read on below if you think deep history is important. academic.oup.com/mbe/advance-...

A general substitution matrix for structural phylogenetics.

Abstract. Sequence-based maximum likelihood (ML) phylogenetics is a widely used method for inferring evolutionary relationships, which has illuminated the

academic.oup.com

Harvard will not comply. “No government — regardless of which party is in power — should dictate what private universities can teach, whom they can admit and hire, and which areas of study and inquiry they can pursue.” — Harvard President Alan M. Garber www.thecrimson.com/article/2025...

Harvard Will Fight Trump’s Demands | News | The Harvard Crimson

Harvard will not comply with the Trump administration’s demands to dismantle its diversity programming and limit student protests in exchange for its federal funding, University President Alan M. Garb...

thecrimson.com

My OpEd in @elife.bsky.social “It feels as if we are trying to fight a series of attacks on science with one arm tied behind our back and our lips half sewn shut.” “Yet we are not beaten, and some of us are downright energized.” elifesciences.org/articles/106...

Science Under Threat in the United States: Feeling abandoned but energized

Many individual researchers are frustrated by the response - or the lack of a response - from universities to a growing crisis.

elifesciences.org

The government’s attack on Columbia University has nothing to do with addressing antisemitism. The goal is to force universities to police and punish students and faculty to Trump’s liking — to use our universities against us to obliterate political protest and chill discourse.

Scientists at universities that have raised graduate student stipends: What have your administrations done to mitigate the costs to lab budgets so that the science itself doesn’t have to be curtailed? Examples of best practices would be appreciated.

The Human Genetics and Genetics, Genomics & Systems Biology PhD programs at UChicago are hosting our second annual info session for prospective applicants. Sign up at bit.ly/GeneticsInfo20… for application tips from a diverse panel of current PhD students and faculty! And please repost! 🧪🧬🖥️

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