Reciprocal Space Station

@rs-station.bsky.social

Landing soon: An academic consortium for open-source, statistical structural biology!

Very happy to have had a chance to attack an initially very low-resolution #cryo-EM map with #ROCKET! Thank you again @alisiafadini.bsky.social and all other co-authors of this important work, which truly shows the power of combining experimental structural biology and #AI inference. rdcu.be/fa9YH

Alisia Fadini@alisiafadini.bsky.social · 4mo ago

ROCKET 🚀 inference-time optimization of AlphaFold to fit structural data is published! rdcu.be/fa9YH Since our preprint, we’ve pushed it to regimes where other methods break: low resolution, weak signal, real experimental edge cases. Here’s what we learned: 1/15

ROCKET-fueled refinement? That's on-brand, along with bad space-themed puns and other cool software projects at the frontier of structural biology. 🚀 ROCKET source code: github.com/rs-station/r... 1/🧑‍🚀 More projects: rs-station.github.io

Alisia Fadini@alisiafadini.bsky.social · last yr.

Structural biology is in an era of dynamics & assemblies but turning raw experimental data into atomic models at scale remains challenging. @minhuanli.bsky.social and I present ROCKET🚀: an AlphaFold augmentation that integrates crystallographic and cryoEM/ET data with room for more! 1/14.

New paper from Hekstra, Wang, et al. shows how to extract more signal from crystallography data using purely reciprocal space arguments. See applications to metalloproteins, drug fragment screening, and time-resolved crystallography! doi.org/10.1126/scia...

Sensitive detection of structural dynamics using a statistical framework for comparative crystallography

Statistical modeling of similarity between crystallographic datasets strongly improves detection of structural dynamics.

doi.org

Congrats to reciprocal astronauts Fadini and Lane on their new publication ( bsky.app/profile/alis...)! Check out their project on the RS-Station GitHub (github.com/rs-station/m...).

Alisia Fadini@alisiafadini.bsky.social · 8mo ago

A huge thanks to the team: TJ Lane, Virginia Apostolopoulou and Jasper van Thor, and to @rs-station.bsky.social for supporting the project! You can check out the full paper here: www.nature.com/articles/s42... or try it on your data: github.com/rs-station/m... 8/8