Stefan Borsley

@stefanborsley.bsky.social

Nonequilibrium chemistry. Royal Society University Research Fellow. Durham Chemistry. Occasionally I travel too.

Can you work out how fast a molecular motor rotates from in situ measurments? Turns out that yes, you can, as we show today in @jacs.acspublications.org pubs.acs.org/doi/10.1021/... @profdaveleigh.bsky.social @stefanborsley.bsky.social

In Situ Quantification of Directional Rotation by a Catalysis-Driven Azaindole-N-Oxide–Phenoic Acid Molecular Motor

We report the in situ quantification of directional rotation of a new type of catalysis-driven rotary motor featuring a phenyl carboxylic acid rotor attached to a 7-azaindole-N-oxide stator through a biaryl C–N bond. Continuous directional rotation of the rotor about the stator is driven by the achiral motor’s rotary catalysis of carbodiimide hydration in the presence of a chiral pyrrolidinylpyridine-N-oxide. The catalytic cycle features an intermediate O-acyl-azaindole-N-oxide ester tether formed between the carboxylic acid of the rotor and the N-oxide of the stator. Face-selective cleavage of the tether by the chiral pyrrolidinylpyridine-N-oxide additive generates relatively long-lived diastereomeric pyridine-N-oxide esters of the phenyl carboxylic acid. These are hydrolyzed during the catalytic cycle to reform the carboxylic acid resting state of the motor, completing net directional 360° rotation. In contrast to previous catalysis-driven motor-molecules, the motor’s directionality could be determined directly from the transient concentrations of the diastereomeric intermediates formed during rotary catalysis. This avoids reliance on restricted rotation models to assess motor directionality and provides direct access to other key performance indicators such as motor speed and catalytic, coupling and fuel efficiency. The in situ-determined directionality of the motor was found to be in excellent agreement with the directionality determined from a restricted rotation model, supporting both the efficacy of the new approach and the validity of using appropriately designed restricted rotation models. The results establish a straightforward method for the in situ quantification of various aspects of motor behavior, aiding the design and optimization of artificial molecular motors.

pubs.acs.org

An argument over a whisky turned into a paper! We apply kinetic modelling to describe Denton’s catalytic Mitsunobu reaction, and show how it can be improved! Not a paper I ever expected to write, but a testament to the benefits of chatting science with friends! Thanks @keithandrews.bsky.social!

Keith Andrews@keithandrews.bsky.social · last yr.

How can Le Chatelier drive kinetics? @stefanborsley.bsky.social and I analyse Denton's organocatalytic Mitsunobu reaction and show water removal improvements outperform catalyst redesigns. Why? Removing water part way through the reaction resets the potential energy surface! doi.org/10.1021/jacs...

TOC graphic for JACS manuscipt, Kinetic Analysis of the Redox-Neutral Catalytic Mitsunobu Reaction: Dehydration, Kinetic Barriers, and Hopping between Potential Energy Surfaces, by Andrews and Borsley, depicting the catalytic Mitsunobu reaction catalytic cycle and two potential energy diagrams.

Check out how we made a minuscule motor rotate 24 times in one direction on its own! Huge thanks to all involved, especially @profdaveleigh.bsky.social for making this work possible @pubs.acs.org Huakui, Axel, @stefanborsley.bsky.social @benjaminoacid.bsky.social & Alex pubs.acs.org/doi/10.1021/...

Structural Influence of the Chemical Fueling System on a Catalysis-Driven Rotary Molecular Motor

Continuous directionally biased 360° rotation about a covalent single bond was recently realized in the form of a chemically fueled 1-phenylpyrrole 2,2′-dicarboxylic acid rotary molecular motor. However, the original fueling system and reaction conditions resulted in a motor directionality of only ∼3:1 (i.e., on average a backward rotation for every three forward rotations), along with a catalytic efficiency for the motor operation of 97% and a fuel efficiency of 14%. Here, we report on the efficacy of a series of chiral carbodiimide fuels and chiral hydrolysis promoters (pyridine and pyridine N-oxide derivatives) in driving improved directional rotation of this motor-molecule. We outline the complete reaction network for motor operation, composed of directional, futile, and slip cycles. Using derivatives of the motor where the final conformational step in the 360° rotation is either very slow or completely blocked, the phenylpyrrole diacid becomes enantiomerically enriched, allowing the kinetic gating of the individual steps in the catalytic cycle to be measured. The chiral carbodiimide fuel that produces the highest directionality gives 13% enantiomeric excess (e.e.) for the anhydride-forming kinetically gated step, while the most effective chiral hydrolysis promoter generates 90% e.e. for the kinetically gated hydrolysis step. Combining the best-performing fuel and hydrolysis promoter into a single fueling system results in a 92% e.e.. Under a dilute chemostated fueling regime (to avoid N-acyl urea formation at high carbodiimide concentrations with pyridine N-oxide hydrolysis promoters), the motor continuously rotates with a directionality of ∼24:1 (i.e., a backward rotation for every 24 forward rotations) with a catalytic efficiency of >99% and a fuel efficiency of 51%.

pubs.acs.org

A really fun project, delivered on the back of Peng-Lai’s fantastic efforts, ably assisted by Martin and of course our collaborators in Strasbourg, Alessandro and @giusepponelab.bsky.social, who taught us lots of polymer and materials chemistry. Thanks all!

Dave Leigh@profdaveleigh.bsky.social · 2y ago

Peng-Lai, @stefanborsley.bsky.social, Martin & our collaborators Alessandro and @giusepponelab.bsky.social demonstrate how a catalyst transduces chemical energy to perform mechanical work in www.nature.com/articles/s41... in @nature.com. tinyurl.com/jny7nen5. Animation @scicommstudios.bsky.social😀