Pilar Herrera Egoavil

@tikaevolutiva.bsky.social

PhD student - Plant Evolution and Ecology at Uppsala University *Former wannabe botanist, currently trying to be a plant evolutionary biologist Evo Genomics | PopGen+QuanGen | Tree breeding | Geopolitics | Decolonization

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Minibwa is a hybrid of bwa-mem and minimap2 and the successor of bwa-mem for short-read mapping. ~4X/2.5X as fast as bwa-mem/bwa-mem2 for WGS reads at comparable accuracy. Native support of directional bisulfite-seq. Applicable to long reads. Preprint at arxiv.org/abs/2606.15357

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The first chapter of my PhD thesis is out: doi.org/10.1111/mec.... !!! This comparative study explores the presence and maintenance of a joint contact zone among three important forest tree species (formed during recolonisation after the LGM). Trees, genetics and evolution, just a perfect combo!

When South Meets North: A Joint Contact Zone Coinciding With Environmental Gradients in Three Boreal Tree Species

Post-glacial recolonisation of Fennoscandia created secondary contact zones in many species, offering opportunities to study how gene flow and selection contribute to their establishment and maintena....

doi.org

First time on Bsky and first big announcement! I am excited to announce that our new study explaining the missing heritability of many phenotypes using WGS data from ~347,000 UK Biobank participants has just been published in @Nature. Our manuscript is here: www.nature.com/articles/s41....

Estimation and mapping of the missing heritability of human phenotypes - Nature

WGS data were used from 347,630 individuals with European ancestry in the UK Biobank to obtain high-precision estimates of coding and non-coding rare variant heritability for 34 co...

nature.com

New paper published together with John Welch on hybrid fitness and how it depends on ploidy and # of distinct ancestries, incl some remarkable fits of data & theory 😶. Keen to hear any thoughts/comments/questions! doi.org/10.1093/gene... Thanks to the team @ Genetics for the smooth experience :)

Predicting Hybrid Fitness: The Effects of Ploidy and Complex Ancestry

Abstract. Hybridization between divergent populations places alleles in novel genomic contexts. This can inject adaptive variation – which is useful for br

doi.org

📢 We have an open position for a postdoc to join my lab. It's a great position @animecol-uu.bsky.social, fully salaried for 2.5 years with all benefits. www.uu.se/en/about-uu/... The project is about transmission patterns of bacteria and antimicrobial resistance (AMR) in aquatic insects. 🧬🦠 (1/3)

Postdoctoral researcher in molecular ecology - Uppsala University

Postdoctoral researcher in molecular ecology, Department of Ecology and Genetics, Uppsala University

uu.se

Do you want to do a Masters in Evolutionary Biology? The call for applying to the MEME program is now open! MEME is a fantastic 2-year MSc between four European Universities on all areas of Evolutionary Biology. Apply and study in Sweden/France/the Netherlands/Germany/USA/Switzerland! www.evobio.eu

Picture of MEME students on the beach