Did a few updates today (refresh your browser to get the latest version): * Added a Drag nodes mode for intuitive manual repositioning * Enabled Shift-based multi-selection * Added Fit view, and a Tree stats panel * Leaf sizes can now be adjusted individually * Added horizontal scale adjustment
Yawako
@yawaguchi.bsky.social
Yawako W Kawaguchi/NIG Postdoc/BioInfomatics/Genomics/Green alga/Vertebrae Japan
I’ve released a tool to sketch and edit phylogenetic trees! yawak.jp/PhyloWeaver/ Load a Newick file and intuitively add/remove/resize branches. Useful for quick conceptual trees, extracting subtrees, or turning ideas into Newick.
PhyloWeaver – Interactive phylogenetic tree editor
Edit and visualize phylogenetic trees directly in your browser. PhyloWeaver lets you interactively rearrange tree topologies and export high-quality figures for publications and presentations.
yawak.jp
Our new study is out! Just one episode of sexual reproduction in Closterium🌙 can create offspring with very different stress reactions compared to the parents. This might be because of massive copy number variations in their genomes, which produce a wide range of phenotypes.
Our first paper on algal experiments at NIG with @yawaguchi.bsky.social! We found that a single episode of sexual reproduction can produce large variation in population growth rates (and prevent extinction) under dual stressors @jevbio.bsky.social doi.org/10.1093/jeb/... bsky.app/profile/bior...
#OpenAccess Nationwide diversity of symbolic “city flowers” in Japan is increasing Yoichi Tsuzuki, Haruna Ohsaki, Yawako W. Kawaguchi et al doi.org/10.1111/1440... awareness of local governments/ biocultural diversity/ ecosystem services/ manual web scraping/ temporal trend
Nationwide diversity of symbolic “city flowers” in Japan is increasing
In this study, we examined how city governments in Japan assess their local biota and their services. The groundbreaking point of our study was the use of “city flowers,” which are the official symbo....
doi.org