Anna Foix
@afoix.bsky.social
PhD candidate at EMBL-EBI and the University of Cambridge (Uhlmann Group). Turning bioimages into numbers and finding the stories they hide. Loves math, climbing, and anime
Thank you, Anna! Also to clarify because we have been asked this by a number of people; yes, accepted papers will be published as part of the official ECCV workshop proceedings.
Anna Foix@afoix.bsky.social · 4w ago🚨🚨🚨 DEADLINE EXTENSION ALERT! 🚨🚨🚨 Great news 🧬💻 The submission deadline for the BioImage Computing (BIC) Workshop at @eccv.bsky.social is now July 20, 2026! We can't wait to see your latest research! 🔬👩💻👨💻 🚪 Submit: openreview.net/group?id=the... 🌐 Info: www.bioimagecomputing.com
🚨🚨🚨 DEADLINE EXTENSION ALERT! 🚨🚨🚨 Great news 🧬💻 The submission deadline for the BioImage Computing (BIC) Workshop at @eccv.bsky.social is now July 20, 2026! We can't wait to see your latest research! 🔬👩💻👨💻 🚪 Submit: openreview.net/group?id=the... 🌐 Info: www.bioimagecomputing.com
BIC @eccv.bsky.social 2026 is OPEN! Show us your new CV, AI & Bio work🦠🔬 🚪: openreview.net/group?id=the... Thanks organisers for making it possible @alex-krull.bsky.social Peter Bajcsy @janfunkey.bsky.social @florianjug.bsky.social Qingjie Meng @virginieuhlmann.bsky.social @maweigert.bsky.social ✨
ECCV 2026 Workshop BIC
Welcome to the OpenReview homepage for ECCV 2026 Workshop BIC
openreview.net
Anna Foix@afoix.bsky.social · 2mo ago🔬 One more year! BioImage Computing has been accepted to @eccv.bsky.social 🎉 Show us your work at the intersection of computer vision, ML & biology! Check out our speaker lineup: @arratemunoz.bsky.social, @jakobtroidl.bsky.social & Juliette Griffié 👏 ⏳ Deadline: 13 July ℹ️ www.bioimagecomputing.com
BIC @eccv.bsky.social 2026 is OPEN! Show us your new CV, AI & Bio work🦠🔬 🚪: openreview.net/group?id=the... Thanks organisers for making it possible @alex-krull.bsky.social Peter Bajcsy @janfunkey.bsky.social @florianjug.bsky.social Qingjie Meng @virginieuhlmann.bsky.social @maweigert.bsky.social ✨
ECCV 2026 Workshop BIC
Welcome to the OpenReview homepage for ECCV 2026 Workshop BIC
openreview.net
Anna Foix@afoix.bsky.social · 2mo ago🔬 One more year! BioImage Computing has been accepted to @eccv.bsky.social 🎉 Show us your work at the intersection of computer vision, ML & biology! Check out our speaker lineup: @arratemunoz.bsky.social, @jakobtroidl.bsky.social & Juliette Griffié 👏 ⏳ Deadline: 13 July ℹ️ www.bioimagecomputing.com
So lucky to have such brilliant friends doing an absolutely smashing job! Do check out MuViT by @albertdm.bsky.social and @maweigert.bsky.social , released at #CVPR2026 for multi-scale resolution images 🔬✨ #DLforBiology #DLJanelia2026 🐙: github.com/weigertlab/m... 📄: arxiv.org/abs/2602.24222
So lucky to have such brilliant friends doing an absolutely smashing job! Do check out MuViT by @albertdm.bsky.social and @maweigert.bsky.social , released at #CVPR2026 for multi-scale resolution images 🔬✨ #DLforBiology #DLJanelia2026 🐙: github.com/weigertlab/m... 📄: arxiv.org/abs/2602.24222
Up next! And we’re now reviewing DL essentials with our very own @janfunkey.bsky.social 🧠✨ #DLJanelia2026
Jan Funke@janfunkey.bsky.social · 2mo agoAnd so it begins! Day 1, Lecture 0 of the first DL for Microscopy Image Analysis course at @hhmijanelia.bsky.social. Slides from @florianjug.bsky.social, presented by our TA Federico Carrara. #dljanelia
And so it begins! Day 1, Lecture 0 of the first DL for Microscopy Image Analysis course at @hhmijanelia.bsky.social. Slides from @florianjug.bsky.social, presented by our TA Federico Carrara. #dljanelia
🔬 One more year! BioImage Computing has been accepted to @eccv.bsky.social 🎉 Show us your work at the intersection of computer vision, ML & biology! Check out our speaker lineup: @arratemunoz.bsky.social, @jakobtroidl.bsky.social & Juliette Griffié 👏 ⏳ Deadline: 13 July ℹ️ www.bioimagecomputing.com
BioImage Computing
a truly interdisciplinary workshop
bioimagecomputing.com
Join us again for the Bioimage Computing workshop at ECCV 2026! Paper deadline July 13th 🔥
Anna Foix@afoix.bsky.social · 2mo ago🔬 One more year! BioImage Computing has been accepted to @eccv.bsky.social 🎉 Show us your work at the intersection of computer vision, ML & biology! Check out our speaker lineup: @arratemunoz.bsky.social, @jakobtroidl.bsky.social & Juliette Griffié 👏 ⏳ Deadline: 13 July ℹ️ www.bioimagecomputing.com
BIC is back guys 😎 Don't go on your summer holiday before sending us your best bioimage computing papers, submission deadline on July 13!
Anna Foix@afoix.bsky.social · 2mo ago🔬 One more year! BioImage Computing has been accepted to @eccv.bsky.social 🎉 Show us your work at the intersection of computer vision, ML & biology! Check out our speaker lineup: @arratemunoz.bsky.social, @jakobtroidl.bsky.social & Juliette Griffié 👏 ⏳ Deadline: 13 July ℹ️ www.bioimagecomputing.com
Thank you far sharing Anna. Looking forward! Also we just found out it will be full day workshop. Submissions will open soon.
Anna Foix@afoix.bsky.social · 2mo ago🔬 One more year! BioImage Computing has been accepted to @eccv.bsky.social 🎉 Show us your work at the intersection of computer vision, ML & biology! Check out our speaker lineup: @arratemunoz.bsky.social, @jakobtroidl.bsky.social & Juliette Griffié 👏 ⏳ Deadline: 13 July ℹ️ www.bioimagecomputing.com
🔬 One more year! BioImage Computing has been accepted to @eccv.bsky.social 🎉 Show us your work at the intersection of computer vision, ML & biology! Check out our speaker lineup: @arratemunoz.bsky.social, @jakobtroidl.bsky.social & Juliette Griffié 👏 ⏳ Deadline: 13 July ℹ️ www.bioimagecomputing.com
BioImage Computing
a truly interdisciplinary workshop
bioimagecomputing.com
Amazing to be at #OME2026 & talk about the future of OME-Zarr. @virginieuhlmann.bsky.social @lorenzocerrone.bsky.social & I were very happy to present the BioVisionCenter, ngio and Fractal yesterday. If you want to learn more, check out today’s ngio workshop: github.com/BioVisionCen...
🎉Happy International Day of Women and Girls in STEM 👩🔬👩💻 I’m a woman in science today because my wonderful female mentors, @virginieuhlmann.bsky.social and @malloryfreeberg.bsky.social, believed in me even when I felt I couldn’t do it. 🙏 #womenInScience #womenInSTEM
Happy International Day of Women and Girls in Science! #WomenInScience 🌍👩🔬🔬 We're dedicated to supporting equality in #microscopy, #imaging and #FlowCytometry - including maintaining a positive gender balance for speakers attending international events. Find out more: https://ow.ly/VbVw50YcIL4
🎉Happy International Day of Women and Girls in STEM 👩🔬👩💻 I’m a woman in science today because my wonderful female mentors, @virginieuhlmann.bsky.social and @malloryfreeberg.bsky.social, believed in me even when I felt I couldn’t do it. 🙏 #womenInScience #womenInSTEM
Last call! This is a great opportunity for those interested in learning and applying SOTA ML/DL models to microscopy data with the leading experts in the field. Personally super excited to be a lead TA along with the amazing @afoix.bsky.social and @edhirata.bsky.social! Hope to see you there :)
Jan Funke@janfunkey.bsky.social · 9mo agoWe moved the AI@MBL course "Deep Learning for Microscopy Image Analysis" to HHMI Janelia (@hhmijanelia.bsky.social). Join us for two weeks of intense lectures, exercise, and hands-on project work! Course dates: June 4-18 2026 Application by: January 15 2026 www.janelia.org/you-janelia/...
All the tiredness and travel are worth it if it means showing the world what D’Arcy taught us. Thanks to @aibio-uk.bsky.social and the local organisers for yesterday’s event in Bristol. It was a pleasure to engage in such stimulating discussions 👩🏻💻🦇. #AI #Morphology #ResearchCommunity #EarlyCareer
Jacqueline Chalakova, @afoix.bsky.social and @denzibubs.bsky.social share their highlights from #CBIAS2025 @cbias.bsky.social, with all three emphasising the welcoming atmosphere. Check out the reasons that #CBIAS2026 should be in your calendar⤵️ focalplane.biologists.com/2026/01/12/c...
Crick BioImage Analysis Symposium (2025) - a review - FocalPlane
Crick BioImage Analysis Symposium (2025) - a review - News
focalplane.biologists.com
Very much looking forward to this tomorrow 🎉 I’ll be sharing my journey from pure CS to tackling multidisciplinary challenges in biology using AI, and how crossing disciplines opens up cool scientific questions. Grateful to @aibio-uk.bsky.social 👩🏻💻🔬✨ #interdisciplinary #AIinBiology #AIforLifeSciences
AI in the Biosciences (AIBIO UK) BBSRC Network@aibio-uk.bsky.social · 8mo ago🤖 AI + Biosciences 📍 Join our workshop @ BristolUni, 13 Jan 2026! ✨ Learn how AI transforms genomics, imaging & biotech 🗓 Register by 4 Jan: aibio.ac.uk/events/bridg... #AI #Biosciences #Research
🚨 Alarm!!! 🚨 AI/ML course for microscopy image analysis!!! 🧐 In 2026 at Janelia (@hhmijanelia.bsky.social), no tuition, housing and meals provided! Isn’t that borderline unbelievable?!? 20 students, ~14 TAs and lecturers 🗓️ June 4-18 2026 ✍️ Jan 15 2026 ✍️ 🔁 pls!! www.janelia.org/you-janelia/...
Deep Learning for Microscopy Image Analysis
Topics The following will be covered extensively during lectures, exercises, and project work: Image denoising and restoration (fully supervised and self-supervised) Image translation (e.g.,
janelia.org
We’ll be at @neuripsconf.bsky.social on Wednesday, 3 December, from 11 a.m. to 2 p.m. (San Diego time). Come and chat with us about why distance matrices and invariances are cool! 🎉 #InterdisciplinaryML #neurips2025 #bioimageanalysis #shapequantification
Anna Foix@afoix.bsky.social · 11mo agoHappy to share that ShapeEmbed has been accepted at @neuripsconf.bsky.social 🎉 SE is self-supervised framework to encode 2D contours from microscopy & natural images into a latent representation invariant to translation, scaling, rotation, reflection & point indexing 📄 arxiv.org/pdf/2507.01009 (1/N)
Maria gave such an excellent and much-needed talk linking transcriptomic data with morphology at @neuripsconf.bsky.social 🔬👩💻 and showing how AI shapes biomedical discovery, and vice versa. @wimlworkshop.bsky.social always brings brilliant speakers! 👩💻👏 #InterdisciplinaryML
If you are attending @neuripsconf.bsky.social in San Diego, go check out Anna's beautiful work on learning shape representations!
Anna Foix@afoix.bsky.social · 8mo agoWe’ll be at @neuripsconf.bsky.social on Wednesday, 3 December, from 11 a.m. to 2 p.m. (San Diego time). Come and chat with us about why distance matrices and invariances are cool! 🎉 #InterdisciplinaryML #neurips2025 #bioimageanalysis #shapequantification
We’ll be at @neuripsconf.bsky.social on Wednesday, 3 December, from 11 a.m. to 2 p.m. (San Diego time). Come and chat with us about why distance matrices and invariances are cool! 🎉 #InterdisciplinaryML #neurips2025 #bioimageanalysis #shapequantification
Anna Foix@afoix.bsky.social · 11mo agoHappy to share that ShapeEmbed has been accepted at @neuripsconf.bsky.social 🎉 SE is self-supervised framework to encode 2D contours from microscopy & natural images into a latent representation invariant to translation, scaling, rotation, reflection & point indexing 📄 arxiv.org/pdf/2507.01009 (1/N)
Next to @afoix.bsky.social from @virginieuhlmann.bsky.social lab @ebi.embl.org talking about data-driven shape qualification for 2D microscopy Images
