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Restoring soil and sediment microbiomes in the Anthropocene - Nature Reviews Microbiology

In this Review, Wood and colleagues discuss how anthropogenic pressures are degrading soil and sediment microbiomes, propose restoration strategies and emphasize the importance of integrating microbio...

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Science | AAAS

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Epistasis and co-adaptation in bacterial genome evolution - Nature Reviews Genetics

Bacterial genome evolution is shaped by epistasis, which can constrain or promote specific evolutionary paths. The authors review how integrating the effects of epistatic interactions into population-...

nature.com

Post Doctoral Scholar

Screen reader users may encounter difficulty with this site. For assistance with applying, please contact hr-accessibleapplication@osu.edu. If you have questions while submitting an application, pleas...

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Plasmids promote antimicrobial resistance through insertion sequence-mediated gene inactivation - Nature Microbiology

Inactivation of chromosomal genes through plasmid-encoded IS elements is an extended mechanism of antimicrobial resistance evolution in bacteria.

nature.com

Genome modelling and design across all domains of life with Evo 2 - Nature

Evo 2 is an artificial intelligence-based biological foundation model trained on 9 trillion DNA base pairs spanning all domains of life that predicts functional properties from genomic sequences and p...

nature.com

Viruses in marine sediments: a review of their effect on biogeochemistry and microbial interactions | Applied and Environmental Microbiology

In the ocean, viruses are known to mediate the carbon cycle, keeping dissolved organic carbon (DOC) in the microbial loop and preventing its movement into secondary consumers (1). However, few direct ...

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Einstein

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Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity - Nature

Reconstructing microbial genomes from 820 reef-building corals collected at 99 reefs across 32 islands throughout the Pacific Ocean highlights the importance of conserving coral reefs as vital reservo...

nature.com

Nature Biotechnology - Detecting gene transfer in microbial communities

Barcoding microbial ribosomal RNA creates a record of gene transfer events without requiring translation. Kalvapalle et al. designed catalytic RNAs to...

nature.com

A novel analysis workflow for simultaneous parsing prokaryotic and eukaryotic microbial genes from metagenomes

Accurately predicting coding genes from metagenomic samples containing a high proportion of eukaryotic content remains a significant challenge. Novel and reliable methods for the simultaneous predicti...

peerj.com

Recent microbial evolutionary insights from metagenomics

Abstract. Microorganisms have profoundly shaped Earth’s biological and geological history, from the origins of oxygenic photosynthesis to present-day globa

academic.oup.com

Microbe-derived aromatic polyketides toward MRSA infection: current advances and perspectives

Covering: 2005 to July 2025Methicillin-resistant Staphylococcus aureus (MRSA), emerging as one of the most common multidrug-resistant (MDR) bacterial strains, has posed a serious threat to global heal...

pubs.rsc.org

Plasmid mutation rates scale with copy number | PNAS

Plasmids are extrachromosomal DNA molecules that spread by horizontal transfer and shape bacterial evolution. Plasmids are typically present at mul...

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Scripps Oceanography Annual Impact Report 2025

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A phage protein screen identifies triggers of the bacterial innate immune system - Nature Microbiology

A library of 400 phage protein-coding genes is used to find a trove of antiphage systems, revealing systems that target tail fibre and major capsid proteins.

nature.com