Excited to have been accepted into this fantastic workshop next month🪰🦠🧫If you are in Chicago area next month, would love to connect!

NSF-Simons NITMB@nitmb.bsky.social · 2mo ago

Experimental biologists, specialists in data analysis, and theorists are invited to join us at our upcoming workshop, Biological Function in Space and Time: From Forces and Cues to Emerging Decision-making in Fates, States, and Shapes! Travel applications are due June 14th tinyurl.com/3fj9bt3k

Excited to present a virtual lightning demo of #BATMAN 🦇, our #TCR #cross-reactivity prediction tool, available at github.com/meyer-lab-cs...

GitHub - meyer-lab-cshl/BATMAN: Bayesian inference of Activation of TCR by Mutant Antigens

Bayesian inference of Activation of TCR by Mutant Antigens - meyer-lab-cshl/BATMAN

github.com

AIRR-Community@airr-community.bsky.social · 2mo ago

📣 Attending AIRR-C Meeting VIII? We’ve sent important information about software tutorial registration to your inbox. 👉 Please check your email and sign up by June 5, 2026. ⚠️ Some sessions have limited spots. Secure yours soon!

Enjoyed it thoroughly! @cancerdynamics.bsky.social's leadership and organizing efforts in the field of AI X cancer dynamics is inspiring.

Irving Institute for Cancer Dynamics@cancerdynamics.bsky.social · 4mo ago

Missed our symposium on AI and computation? Check out highlights of the many of the conversations, exchanges, and moments in our photo album > photos.app.goo.gl/dU4bfi7v3N2m... To learn more about the event, read our recap> bit.ly/40PHlvR

Best conference I attended in a while, captures the full breadth of biophysics. So many refreshing ideas to understand living systems 🦋🐦‍⬛🪰🦠🪸🐙

Ahmed El Hady @zamakany.bsky.social · 9mo ago

It was a pleasure to co-organize with @allysonsgro.bsky.social Junior Scientist Workshop on Theoretical Biophysics at @hhmijanelia.bsky.social. We had great lectures and tutorials on theoretical approaches used to understand biological phenomena. Can't wait for the 2026 iteration, stay tuned.

Authoritative review from The one and only @ghoshonthemove.bsky.social ☺️on her doctoral work on NSCLC 🫁 @mcgillgci.bsky.social portlandpress.com/biochemsoctr... Need to stay tuned to see if these mutations can generate targetable neoantigens in tricky low-TMB cancers

Our latest work featured in The Scientist! Sneha Khedkar Did a great job in summarizing the work accessibly while retaining some of the fine details. Happy reading! www.the-scientist.com/batman-signa...

BATMAN Signals T Cell Receptor Crossreactivity

A new AI tool that models how variations in peptides change T cell receptor binding could help design immunotherapies with fewer off-target effects.

the-scientist.com

Gotta say the cshl.edu website looks extra cool today

@cshlnews.bsky.social @samueldiamond.bsky.social Thanks for the feature 🧡

Cold Spring Harbor Laboratory@cshlnews.bsky.social · last yr.

Developed by CSHL researchers, BATMAN is a new AI model trained to predict which cancer markers immune cells will target—while avoiding healthy ones. This could help scientists develop safer, more effective therapies for cancer & all human illnesses. www.cshl.edu/batman-bring...

Got new #TCR-pMHC data to send our way into BATCAVE? Wanna try BATMAN to predict targets of your #TCR? We would love to hear from you! 💽Database+codes: github.com/meyer-lab-cs... 💻BATMAN software + tutorials: github.com/meyer-lab-cs... 🦇Lets decode TCR-pMHC logic, one mutation at a time🦇

Hannah Meyer@hannahvmeyer.bsky.social · last yr.

Check out how we tackled one of the fundamental challenges in immunology, out today @cp-cellsystems.bsky.social: www.cell.com/cell-systems.... Our major innovations are BATCAVE and BATMAN, two new players to get us closer to solving TCR-pMHC predictions!

First postdoc paper with @hannahvmeyer.bsky.social on #TCR cross-reactivity database & modeling out now in Cell Systems: doi.org/10.1016/j.ce... BATCAVE database + Paper codes: github.com/meyer-lab-cs... BATMAN + Tutorial Notebooks: github.com/meyer-lab-cs... #ImmunoSky #T-cells #CancerImmunology

Thrilled to visit @hhmijanelia.bsky.social to share how fine mapping of large-scale TCR-antigen interaction networks are revealing design principles and physical biology of the adaptive immune system! #ImmunoSky

Janelia Research Campus@hhmijanelia.bsky.social · last yr.

📣 Students + postdocs in theoretical biophysics 👉 Join us in October to present your research, engage in lively discussions, and network with peers. ✈️ Hotel, meals, & travel fully covered 🔗 Apply by June 10 ➡️ janelia.news/THB25 @hhmi.org @allysonsgro.bsky.social @zamakany.bsky.social

Third #ATCR25 talk by Hannah Meyer on using BATMAN to model the TCR cross reactivity space.

Catch our latest work on modeling TCR cross-reactivity here

Pieter Meysman@pmeysman.bsky.social · last yr.

Ready to start the #ATCR25 meeting celebrating 10 years of the AUDACIS consortium with this amazing line-up of speakers!

Nice day to start the CSHL #cshlsysimm @cshlmeetings.bsky.social Meeting

Starting tomorrow with an exciting speaker lineup! Catch up with our work on thymic negative selection and T cell cross-reactivity! @cshlmeetings.bsky.social

natimmunol.nature.com@natimmunol.nature.com · last yr.

Looking forward to discussing research in #systems_immunology at CSHL (meetings.cshl.edu/meetings.asp...)

Catch up with some of my latest TCR work, to be presented by my PI, Dr. Hannah Meyer

Pieter Meysman@pmeysman.bsky.social · last yr.

#Abstract submission deadline for #ATCR2025 is this Friday! We are again very grateful to have such a strong lineup of #Tcell-receptor experts joining us in Antwerp. Currently at 80% capacity so do not wait to register. www.uantwerpen.be/atcr2025

Comprehensive epitope mutational scan database enables accurate T cell receptor cross-reactivity prediction [updated] BATCAVE & BATMAN predict TCR activation, off-target effects, & polyclonal responses.