Ana Serra Silva

@anaserrasilva.bsky.social

Phylogeneticist and evolutionary biologist. Research fellow at UCL Biosciences | Communications Officer for @systassn.bsky.social

1/ Deep-time phylogenetics is hard: overly simplistic substitution models can mislead tree estimation at the billion year timescale. Our new preprint introduces GTRspmix, a protein modeling framework designed to more realistically model site-to-site heterogeneity in amino acid replacement. 🧵

Uuuh, email from predatory journal but with some effort put in! These guys had to at least check my GoogleScholar (or have AI check for them... most likely). No hepatology or sylviculture/forestry this time! Amazing!

Anyone else find going to their country of origin's consulate/embassy to be quite jarring? I've spent an hour in Portugal without leaving London this morning, and got treated to the usual delays, shoutiness and tired old jokes I've heard since I was a kid... nope, they're still not funny...

The Tree of Life available as a paperback today. bit.ly/41Mq7jp Breezy, scholarly, whimsical, rigorous + companionable guide to our family history. TLS Erudite, highly informed, frequently amusing.. compelling + memorable. Science Enjoyable + ambitious. An exhilarating cartographic journey. WSJ

Cover of the paperback version of The Tree of Life by Max Telford

Join us and our fellow European systematics associations in Uppsala, Sweden for the 4th BioSyst.EU meeting! Dates: August 17-19, 2026 Abstract submission and early bird deadline: May 31st Registration deadline: July 17th Details: www.trippus.net/BioSyst2026 We hope to see there! #BioSystEU2026

BioSyst.EU 2026@biosysteu2026.bsky.social · 5mo ago

Mark your calendars! The BioSyst.EU conference is taking place in Uppsala, Sweden from 17th to 19th August! Register now on our website (or using the QR code): www.trippus.net/BioSyst2026 #BioSystEU2026

I might like hats a tad too much... Spent longer than I care to admit staring at this tree, cataloguing ahem dubious decisions... But the most egregious... Stetson is a brand not a hat type! And I'm fairly sure they don't (usually) make bicorns/tricorns... 🤔 Now back to actual phylogenies.

The Linnean Society of London@linneansociety.bsky.social · 4mo ago

We had to stop ourselves from adding all our best wig pictures, because we would be here all day, wasting time that we could be spending wearing hats. Besides, it begged the question, is a wig a hat? Experts in the emerging field of hatsonomy have yet to come to a firm conclusion. What do you think?

An evolutionary tree showing an attempted reconstruction of the complex history of the modern hat.

So you are using IQ-TREE to estimate a tree for "deep time" phylogenetics using amino acid alignments. There is a lot of confusion about how to test model fit. Here are some suggestions.

I have zero interest in French football teams but invariably know when PSG wins. Why? Because the fans congregate at the nearby pub and make a racket... Tonight, in additon to the usual football crowd noises, there's drums 🙄

If I ever drop off the map, this isn't a bad place to come looking. Weather permitting... ⛵ Do expect maniacal laughter, though. To this day, I don't know if my skipper was more afraid of rough weather or my undisguised glee in said weather... (Beaufort up to 6/7, I do have some sense...)

Vessel tracking map for Globe40 regatta showing Cape Horn region.