Bosse lab at CSSB Hamburg

@bosse-lab.bsky.social

Illuminating viruses @CSSBHamburg. Check out herpesfolds.org for a comprehensive proteome-wide structural prediction database. A little zoo at home. Equal responsibility dad of three. Views own

Do you want to image RNA in living cells? Check out our new live-cell Click labeling approach. An amazing collaboration with the Meier Lab at UHH and the Wagenknecht Lab at KIT! doi.org/10.1002/anie... Congratulations, especially to Doerte, Eileen, and Iven! Thanks to DFG CRC1648

Live‐Cell RNA Imaging via Clickable TriPPPro Nucleotide Reporters

The intracellular delivery of trans-cyclooctene and bicyclo[6.1.0]nonyne as sterically demanding groups for the inverse electron-demand Diels–Alder was achieved by the triphosphate prodrug (TriPPPro)....

doi.org

Conclusion of RNA assessors in #CASP16 - we are still in the “template” phase. Prediction of nucleic acids structure is still challenging for targets without templates, often relying on intuition. No big leap in accuracy since CASP15. AI based methods have not (yet?) made a major difference.

Conclusion slide on RNA assessment

Stone conclusion by hearsay from day 1 at #CASP16 all top methods used AF3 somehow. Improvements are made by increased sampling (FFT etc), ranking of models still a challenge. Some improvement on antibodies.