While in southern Italy, had to do the thing

Microscopy Nodes 3.1 is out for Blender 5.2! 🎉 This has cool new features for conditional masking, working with even larger data (regional upscaling), and data manipulation! Watch the new youtube tutorials that explain the features: www.youtube.com/playlist?lis...

LOOK AT THIS DOG

Just enjoying another perk of living in Europe

It's an exciting day for #Fiji users! Now read and write @zarr.dev v3 and #OMEZarr v0.5. Don't want a million tiny files in your #zarr? Shard that sucker! Read the details here forum.image.sc/t/fiji-can-r...

Fiji can read and write Zarr3 & OME-Zarr v0.5 (new N5 release!)

Updating your Fiji-Latest installation will give you the newest versions of the N5 library, enabling OME-Zarr v0.5 / Zarr v3 support with sharding! What's new? Reading zarr 3 datasets (sharded and u...

forum.image.sc

This looks like it will be a great resource for learning bioimage analysis 👇🏻 onlinelibrary.wiley.com/doi/10.1111/...

Modular training resources for bioimage analysis

Modern microscopy enables us to measure structural and dynamical properties of many biological processes and is therefore an indispensable research tool. However, the amount and complexity of the pro...

onlinelibrary.wiley.com

🧪 @aicjanelia.bsky.social and @scientistrachel.bsky.social have just published a new quantitative tool, OpticalFlow3D, for tracking amorphous motion in 3D. Try it out and let us know what you think! tinyurl.com/OpticalFlow3D

📣 Tracking cells through time – including divisions – is a core problem in live-imaging microscopy. We built HOCT, an edge-centric Transformer that hits state-of-the-art on the Cell Tracking Challenge without a pretrained image encoder. Work led by @jookuma.bsky.social arxiv.org/abs/2607.11754 🧪🔬💻

(derogatory)

Aaron Rupar@atrupar.com · 3w ago

Stephen Miller on Lindsey Graham: "He's someone we're still gonna be talking about 200 years from now"

FINALLY a histogram in napari! ♥️

napari@napari.org · 3w ago

*Finally*, napari gets a built-in histogram! It's still a work in progress but already *very* cool if we do say so ourselves, with live update based on the canvas and progressive, background update when computing on large full data.

Struggling for something to do in a TWO DAY gap without ⚽? How about trying our pre-release of napari 0.8.0? napari.org/dev/release/... Of note, this release drops Py3.10 support and deprecates PyQt5 in favor of PyQt6. It also adds some neat new features and improvements! See below: 👇

Eating street food in Livorno

Delighted to share our latest preprint "NucleiSky enables cross-scale multimodal registration of microscopy data using nuclei constellations" www.biorxiv.org/content/10.6... Code and App: github.com/CellMigratio...

as always we need to be careful about what it is that we are using criticisms to actually do in the world and not just what political aesthetic we are trying to express

What if you could watch chromatin change in live neurons…..IN REAL TIME?Share if this is your dream! My lab is making biosensors to make chromatin visible as neurons wire into circuits & are hiring an Associate Scientist to build, not just execute. Apply: stjude.wd1.myworkdayjobs.com/stjude/job/M...

📢📢 We are hiring a Bioimage Analyst at the BioVisionCenter! 📢📢 Join our collaboration with the Flow Cytometry Facility and contribute back to the international efforts on open standards for bioimaging data! More information here, reach out if you have any question: jobs.uzh.ch/job-vacancie...

UZH: Bioimage Analyst

The University of Zurich is the largest university in Switzerland and one of the most prominent in Europe. For research purposes the Biovision Center and Flow Cytometry Facility offer services to supp...

jobs.uzh.ch

Ok what if the solution here is to send Ryan Gosling on a desperate mission to find the only natural predator of the algae.

onion person@junlper.beer · 2mo ago

it’s absolutely not the most important thing at all but i’m obsessed with th algae in the reflecting white house pool. every afternoon i check for algae updates. i can’t get enough algae updates

Just a generational political talent

Aaron Rupar@atrupar.com · 2mo ago

Mamdani's speech at the Knicks parade was easily the best I've ever heard at an event of that sort. I posted the whole thing on YouTube for your viewing pleasure. Highly recommended.

napari 0.7.1 is now available!! 🚀 🎉 Read the full release notes here: napari.org/stable/relea... Highlights: the scale bar inherits units from layers, colorbars for points layers, locking layers, and a signed Windows bundle! We thank especially our 9 new brilliant contributors 🤩

Since summer is coming and I have a metric ton of mint in the garden I've been working on my mojito recipe and the two key things seem to be: More rum (like 50% more) than the recipes usually call for Using a mint simple syrup in place of regular to pack in extra mint flavor

Pretty sure I fought this guy in Expedition 33.

Teegan@teegan.dog · 2mo ago

bisexual final boss

Thanks I've been working out

Wake up babe new panpsychism just dropped

NBC News@nbcnews.com · 2mo ago

Los Angeles mayoral candidate and reality star Spencer Pratt sat down with NBC Nightly News Anchor Tom Llamas to talk about his crystal collection, saying he believes "anything God put on this earth has energy."

*Frantically flipping through the pages of the latest Harpers*

Kyle Griffin@kylegriffin1.bsky.social · 2mo ago

This is a real AI-generated video just posted by both Trump and the White House online.

Last week to apply! 👇🏻👇🏻👇🏻 (Closes Friday)

Damian Dalle Nogare@damiandn.bsky.social · 4mo ago

🚨🚨🚨JOB ALERT🚨🚨🚨 The Image Analysis Unit at Human Technopole in Milan is recruiting for two positions to join our growing team: 1) Bioimage Analyst 2) Research Software Engineer (RSE) Read on to learn why one of these two people should be you!

The Cimini lab is hiring for both postdocs and interns! The postdoc role will cover bioimage analysis projects and educational material creation; the intern will be working on our Bilayers project for helping distribute and access deep learning tools for bioimage analysis. Click below to learn more!

Postdoctoral Associate and Data Science Intern roles - Broad Institute, Cambridge MA USA

The Broad Institute Imaging Platform (the team behind CellProfiler, Piximi, and Bilayers) is currently hiring for postdoctoral and intern roles! Postdoc role: we are looking for 1-2 candidates who ha...

forum.image.sc

Python developers I'm am BEGGING you, on my hands and knees, to include import statements in your code examples. Please do not make me guess which combination of "from X import Y" you've used.

Microsplit paper is published! Image multiple structures in one fluorescence channel, and computationally unmix them later. Can't wait to see what the community does with this and what amazing science it can enable. Huge thanks to the coauthors!

Florian Jug@florianjug.bsky.social · 3mo ago

It is finally out there in published form. 🎉 #MicroSplit (with an 𝕊) #Microscopy 🔬 #AI 🤖 www.nature.com/articles/s41... And no paywall... so... enjoy the read! 💸 👋 This is where the post could end... but I will have to go on for a bit below... 😉 🧵

Update from rural lunigiana: apricots and pears coming along nicely, and one lonely asparagus coming up from the patch