For single cell foundation model fans, Raul Rabadan & colleagues just published GET in @nature.com, which trained on chromatin accessibility data to predict transcription factor interactions/motifs, cis-regulatory elements, & gene expression from 213 human cell types www.nature.com/articles/s41...
A foundation model of transcription across human cell types - Nature
A foundation model learns transcriptional regulatory syntax from chromatin accessibility and sequence data across a range of cell types to predict gene expression and transcription factor interactions...
nature.com