I’m looking for a PhD student to work on an exciting new collaboration with @azizalkhafaji.bsky.social at the @broadinstitute.org. Together we are using single cell long-read sequencing to understand tumour evolution and microenvironments. Hybrid computational and molecular role. 🧬

Fitting first post to BlueSky Recapping a whirlwind week.. 1) isoforms, 2)illumina, 3)SBX 1) Check out our new preprint: Multi-platform evaluation and optimization of single-cell RNA isoform sequencing. Ever wonder if/how different single-cell platforms impact RNA isoform sequencing performance?

Multi-platform evaluation and optimization of single-cell RNA isoform sequencing

Long-read transcriptomics enables isoform identification and quantification at single-cell resolution, but analysis is complicated by artifacts introduced during library preparation. We characterize t...

biorxiv.org