📣 CCP-volumeEM Show & Tell Webinar Join us on 20 Oct for ‘Data stewardship and biological imaging data management: a summary of FAIR data life cycle’ with Dr Aybuke Kupcu Yoldas (EMBL-EBI). 💻 Online 🔗 www.ccp-volumeem.ac.uk/showandtell/... #VolumeEM #Bioimaging #FAIRData

Upcoming - 'Data Stewardship...' with Dr Kupcu Yoldas (20th October 2026) — CCP in vEM

ccp-volumeem.ac.uk

Now on YouTube: AI OnDemand (AIoD): An extendable, user-friendly framework for segmenting images at scale In this webinar, Dr Cameron Shand introduces AIoD and shows how it can make deep-learning image analysis more accessible, scalable and reproducible. Watch here: www.youtube.com/watch?v=2yWh...

AI OnDemand:An extendable, user-friendly framework for segmenting images at scale with Cameron Shand

YouTube video by CCP-volumeEM

youtube.com

Join us for the next #CCPvolumeEM Show & Tell! 🧠 Dr Kedar Narayan (NCI/NIH) on 'empanada: what’s cool, what’s new and what’s next' 📅 15 Sept, 1:30pm UK | Online 🔗 crick.zoom.us/webinar/regi...

Missed our June Show & Tell webinar? The recording of Rocco D’Antuono’s talk, 'Napari software for 3D segmentation with the napari-zelda plugin' , is now available 🎥 Catch-up here: www.ccp-volumeem.ac.uk/showandtell/...

Curious about AI for image segmentation, without installation headaches? Join our next Show & Tell with Dr Cameron Shand to discover AI OnDemand (AIoD), a framework for running deep learning models on local, HPC or cloud compute 🗓 21 July, 12:30pm BST 🎟 Register: crick.zoom.us/webinar/regi...

Join us for our next CCP-volumeEM Show & Tell: 'Napari software for 3D segmentation with the napari-zelda plugin' with Rocco D'Antuono 📅 Tue 30 June, 12:30 BST 🔗 Register: crick.zoom.us/webinar/regi... 🎓 Learn more: www.ccp-volumeem.ac.uk/showandtell/...

In March, CCP-volumeEM hosted an OME-NGFF hackathon, bringing the community together to collaborate, share ideas and advance tools for volume electron microscopy. 🔬💻 Read about what we worked on and hear directly from two attendees about their experiences: www.ccp-volumeem.ac.uk/hackathons/h...

OME-NGFF Hackathon March 2026 — CCP in vEM

ccp-volumeem.ac.uk

🔬 Would you like to learn more about image analysis for Correlative Light and Electron Microscopy? Join us at the Francis Crick Institute, London, for this CCP-volumeEM led initiative from 30 Nov–4 Dec 2026. 👉 Find out more: www.crick.ac.uk/whats-on/ima...

Image analysis for Correlative Light and Electron Microscopy (CLEM)

crick.ac.uk

Now available on our YouTube channel: Chris Barnes’ CCP-volumeEM Show & Tell webinar, “OME-Zarr: A Next Generation File Format for FAIR Bioimaging Data”. Catch up here: youtu.be/HsqH6RAcJps?...

OME-Zarr: A next generation file format for FAIR bioimaging data with Chris Barnes

YouTube video by CCP-volumeEM

youtu.be

Join our next CCP-volumeEM Show & Tell webinar! 'OME-Zarr: A Next Generation File Format for FAIR bioimaging data' with Chris Barnes 📅 Tuesday 19 May, 12:30pm BST 💻 60-minute online talk You can register here: crick.zoom.us/webinar/regi...

Missed our April Show & Tell? Watch Dr Piper Fowler-Wright’s talk, “Jupyter Notebooks for Shareable Research Outputs” : a practical introduction to using notebooks for reproducible, well-documented research 🧪 🎥 www.youtube.com/watch?v=wzh4...

Jupyter Notebooks for Shareable Research Outputs with Dr Piper Fowler-Wright

YouTube video by CCP-volumeEM

youtube.com

Join us for the next CCP-volumeEM Show & Tell webinar: Jupyter Notebooks for Shareable Research Outputs with Dr Piper Fowler-Wright (Rosalind Franklin Institute). 🗓 Tuesday 21 April 🕧 12:30pm BST 💻 60-minute online talk Find out more and register: www.ccp-volumeem.ac.uk/showandtell/...

Analyse public OME‑Zarr images using models from the BioImage Model Zoo! 🦒 Join us April 16 🕐️ 13:00–15:00 CEST — a perfect fit for Python 🐍 users ready for hands‑on work. @ai4life.bsky.social #OMEZarr #AIinScience #ImageAnalysis #Workshop forms.gle/5hQh1BoACPaF...

🚨🔬🚨🔬🚨 We are pleased to announce that registration for the 7th edition of the Crick BioImage Analysis Symposium #CBIAS 2026 is now open! 🕐November 23rd-24th, 2026📍The Francis Crick Institute, London. We look forward to seeing as many of you as possible there (or online 😀)

⏳️ Have you registered yet? #EuroBioImaging's Image Data Community Days event is happening next week. If you're curious about biological & preclinical #imagedata analysis, management, tools & more this event is for you. Registration is FREE & open to all⤵️ www.eurobioimaging.eu/events/image...

Missed our latest CCP-volumeEM Show and Tell webinar? Dr Kimberly Meechan’s talk on Good practices for image analysis software is now available to watch on YouTube: www.youtube.com/watch?v=HHJJ...

Good practices for image analysis software with Dr Kimberly Meechan

YouTube video by CCP-volumeEM

youtube.com

Dominik Kutra from @ilastik-team.bsky.social presenting the latest updates to #ilastik for #BioImageAnalysis at the @zeiss-microscopy.bsky.social "From 3D Light to 3D Electron Microscopy“ symposium at @crick.ac.uk - very brave live demo with TB scale data! @em-stp.bsky.social #VolumeEM

🔬 We highlight the #TechEM seminars in an interview with @drtranfield.bsky.social, @vibbioimagingcore.bsky.social, part of Flanders BioImaging Node, written by our Scientific Ambassador Muriel Mari. #ElectronMicroscopy Check out this great initiative ⤵️ www.eurobioimaging.eu/news/techem-...

Enjoying @k-meech.bsky.social's #ShowAndTell talk in the @ccp-volumeem.bsky.social series while on holiday, with suitable holiday lunch 😄 The talk will be uploaded to the #CCPvolumeEM YouTube channel, link from the website: www.ccp-volumeem.ac.uk/showandtell #BioImageAnalysis #CoSeC #VolumeEM

Did you know that if you are based in the UK, you can apply for funding to access #BioImageAnalysis services via the UK node of @eurobioimaging.bsky.social ? Next application deadline is March 31st! www.rms.org.uk/community/ne...

UK Bioimaging User Access Fund

Up to £5000 funding available to access imaging technologies and analysis services at the UK Node of Euro-BioImaging

rms.org.uk

Are FMs actually FMing? ⛓️🔬 Thrilled to share that our paper on Foundational Models for mitochondria segmentation in EM is heading to the @iclr-conf.bsky.social 2026 LMRL Workshop! 🚀 Check out the full work here: 📄 ArXiv: arxiv.org/abs/2602.08505 📄 OpenReview: openreview.net/forum?id=Bba...

Are Vision Foundation Models Foundational for Electron Microscopy Image Segmentation?

Although vision foundation models (VFMs) are increasingly reused for biomedical image analysis, it remains unclear whether the latent representations they provide are general enough to support effecti...

arxiv.org

Hello, world! We are starting a worker cooperative to build, maintain, teach, and support open source scientific imaging software. image.coop/blog/posts/2...

Our first #CCPvolumeEM #hackathon is underway, with some amazing merch! We're looking at building community resources and knowledge for the use of #NGFF in #volumeEM #BioImageAnalysis #OMEZarr #OMENGFF @cosec-ukri.bsky.social

Looking forward to learning more about this and how it can be used for #volumeEM at the #CCPvolumeEM #NGFF hackathon at @ebi.embl.org this week! #BioImageAnalysis @cosec-ukri.bsky.social #OMEZarr

Joel Lüthi@joelluethi.bsky.social · 7mo ago

We’re excited to share our latest preprint on Fractal: our approach towards FAIR bioimage analysis at scale with OME-Zarr-native workflows. Fractal defines interoperable tasks on OME-Zarr and provides a platform for TB-scale image analysis. (1 / 10🧵) www.biorxiv.org/content/10.6...

New Web Page - Volume EM Industrial Partners www.volumeem.org/industrial-p... We’re excited to introduce our newly curated Industrial Partners page, showcasing organizations recognized by the volumeEM Community as key contributors in the field.

📢 UK RESEARCHERS - Ever wished you could try a completely different imaging approach on your sample but lacked access to equipment or funds? That's exactly what the Euro-BioImaging UK Node User Access Fund is for! Applications are open year-round, with 3 deadlines/yr: 📅 31 Mar | 31 July | 30 Nov

Our first 'Show & Tell Series' webinar, presented last week, is now available on YouTube. Watch here: www.youtube.com/watch?v=E-pi... We hope it’s useful to the community - please share with anyone who may be interested #VolumeEM #Bioimaging

A brief introduction to the use of containers for reproducible image analysis with Dr Martin Jones

YouTube video by CCP-volumeEM

youtube.com

An important focus of @cosec-ukri.bsky.social activities like #CCPvolumeEM and other CCPs is the environmental impact of scientific computing. @epcc.bsky.social have teaching materials at epcced.github.io/2026-02-26_G... Comic image from xkcd.com/1379/ #GreenHPC #GreenComputing

Do you do image analysis? Want to make it more robust and reproducible? Have you heard of containers, but don't know why they’re useful, and how to use them? @martinjones.bsky.social will explain all: crick.zoom.us/webinar/regi...

Welcome! You are invited to join a webinar: CCP-volumeEM Show and Tell - February 2026. After registering, you will receive a confirmation email about joining the webinar.

'A brief introduction to the use of containers for reproducible image analysis' with Dr Martin Jones Abstract: Reproducibility of scientific data analysis is critical, but can be particularly challe...

crick.zoom.us

💖 We join #LoveDataWeek2026 by sharing the recordings from Image Data Community Days 2025! Follow the “Where’s the data?” theme with on-demand sessions on FAIR principles, analysis tools, AI & preclinical imaging. 🎬 Watch anytime here youtube.com/playlist?lis...