tinyurl.com/yzjuadpu Our ALARUM protocol is now out #JPIAMR! How do we make metagenomics and One Health actionable - especially in LMICs, where microbiology and sewage surveillance are not straightforward? ALARUM aims to tackle this using innovative pooled metagenomic sequencing...(1/3)
Esther van Kleef
@esthervk.bsky.social
Infectious disease epidemiologists working on AMR, modelling and ID surveillance @WHO and UoOxford. Alone we move fast, together we move mountains
AMR researchers and professionals, please join the #GRAMproject on 29th Jan to learn more about key tools and resources, including MICROBE, GLASS, the AMR R package, and the AMR data repository! Register below. Story: bit.ly/4pJuBAD
GRAM to host 29th January webinar on AMR tools and resources
bit.ly
Webinar: AMR tools and resources: An introduction for health professionals and researchers 📅 Date: 29 January 2026 👉 09:30–11:00 GMT Register: zoom.us/webinar/regi... 👉 15:00–16:30 GMT Register: zoom.us/webinar/regi...
Missed the launch of the latest #WHO_GLASS report? Here a brief newsdesk summary @thelancetinfdis.bsky.social highlighting the progress made in GLASS participation, and why increased investment in AMR, incl. improved access to basic microbiology, remains pressing.. www.thelancet.com/journals/lan...
WHO publishes update on global antibiotic resistance
A new report from WHO highlights the increasing threat of antibiotic resistance, particularly in regions with limited surveillance and access to antibiotics. Timothy Jesudason reports.
thelancet.com
New PREPRINT! tinyurl.com/yynzevrh Thanks to a true transdisciplinary collaboration, we developed and evaluated a low-cost community #AMR intervention set in rural Burkina Faso and DRCongo. Combining #WHO #AWaRe–based feedback/training (medicine providers) and AMR awareness campaigns (community).
Alternative way of science communication: @worldpop-uos.bsky.social made a podcast of our recent work on modelling for pandemic decision making in @eurosurveillance.org! Click on the link below to listen 👇
🔬 A new #MOOD #HorizonEU study reveals how #COVID19 modelling, data use & collaboration evolved across #Europe - offering key lessons for future pandemics. 📖 🔊Read more + listen: www.worldpop.org/blog/lessons... @uosmedia.bsky.social @esthervk.bsky.social @horizoneu.bsky.social @ukhsa.bsky.social
Really great to see that our paper is now officially published in the latest #Eurosurveillance. As it was accepted with only minor edits, this earlier post still captures the key messages: tiny.cc/036u001.
Our new issue is out, and includes research on 🦠 surveillance of iGAS in European countries and factors associated with severe iGAS and death in children & adolescents 📈 how COVID-19 modelling supported public health decisions in Europe Read it here 🔗 www.eurosurveillance.org/content/euro...
I am open to the idea that there are people who don't have and don't want to gain the skills to engage directly with their data but every single day that I do I learn the answer to a question you'd never even think to ask unless you were personally staring into the abyss of an uncleaned dataset.
Coming Monday 13 October, WHO will launch the latest Global antibiotic resistance surveillance report. Don't miss it, register here! www.who.int/news-room/ev...
Very excited for this event on the 9th July! It's part of our #AMR short course but open to everyone as it's online. Do join in and here what the amazing Prof Dame Sally Davies has to stay on the current status of global action on #AMR! @lshtmamrcentre.bsky.social
🎙️ Join Prof Dame Sally Davies, for an insightful seminar on global action against AMR. In this seminar, she will share updates on the UN High-Level AMR agenda, the evidence panel & what’s next for global policy. 📅 9 July 2025 🕰️ 13:00 BST 📍 Online 🔗 bit.ly/4kVSVgP
We're recruiting a postdoc in our lab @mesurs-cnam.bsky.social (Paris) to work on epidemic modelling over healthcare networks, as part of the EU project ARCANE ! 💻🦠 Start date between 09/25-01/26, 2y contract Interested in AMR, healthcare-related research & mathematical modelling? Find out more! ⬇️
IDDjobs — Postdoctoral position in epidemic modelling over healthcare networks — Conservatoire national des Arts et Métiers
Find infectious disease dynamics modelling jobs, studentships, and fellowships.
iddjobs.org
Great ID modelling opportunity to aim for real impact on mitigating and monitoring AMR in sub-Saharan Africa. You'll work closely with us @ox.ac.uk, and Oxford’s Modernising Medical Microbiology group, as well as collaborators at CRUN (Burkina Faso) and KWRTP-KEMRI (Kenya). tinyurl.com/mry25kxe
Epidemiologist
Epidemiologist for modelling AMR transmission in LMICMore than 500 staff members at the Institute of Tropical Medicine (ITM) contribute e...
tinyurl.com
The latest Global Antimicrobial Resistance and Use Surveillance System (GLASS) report on antimicrobial use is now out, reporting on 2022 national AMU surveillance data globally tinyurl.com/3muyp2pu @who.int .
How should we redesign data and modelling ecosystems for future crises? NEW PREPRINT: Drawing on survey insights from modelling teams across Europe, we explored how modelling practices, data-sharing, science-policy links, and evidence use evolved during the pandemic: tinyurl.com/4mptshh7 1/5
📣 UPDATE: OK, still working with some others to figure out the best way to present it all, but in the meantime here's the first batch of links to the most-recent archived versions of every page at the CDC prior to the Trump/Musk Purge: acasignups.net/25/02/02/whi...
In which I provide links to archived versions of every CDC.gov page available pre-purge (Part 1 of 15)
As horrific as it is that the Trump/Musk Administration is purging data from federal websites, it's good to know that the Internet Archive has been archiving much of it. However, in addition to the Ar...
acasignups.net
At the 9th AMR Conference in Basel today, Olga Tosas Auguet from @who.int shared key updates on global AMR trends from the Global Antimicrobial Resistance and Use Surveillance System (GLASS).
Rather than resistricting risk monitoring to reactive outbreak response, we highlight effective applications that enhance early detection and prevention of outbreaks. This aligns with #CollaborativeSurveillance @who.int and its advocacy for integrated/ cross-sectoral approaches to ID surveillance.
NEW PAPER: When and how to embed risk data in infectious disease surveillance? Problem: Traditional infectious disease surveillance consisting of facility-based reporting of cases, often delays outbreak response due to disease progression, healthcare seeking, diagnostic and reporting lags. 1/5
🧪 UKHSA has confirmed a case of influenza A(H5N1) in a person in West Midlands region. #IDSky #EpiSky 🏥 Individual is currently well & was admitted to a High Consequence Infectious Disease unit 📰 Currently no evidence of onwards transmission from this case 🔗 www.gov.uk/government/n...
Human case of avian flu detected in England
UKHSA confirms rare case of bird flu (H5N1) in the West Midlands region.
gov.uk
🚨 Applications are NOW OPEN for Applied Epi’s 2025 scholarships! 🚨 💡 For teams in low- & middle-income countries working in epidemiology, this is your chance to access funding for courses and support services that help transition to R. 🗓️ Deadline: Feb 10, 2025 🌐 Apply here: appliedepi.org
Nice overview of challenges & tool-based solutions, plus important non-tool-based facilitators for sustainable #OutbreakAnalytics: locally-led analytical teams, cross-disciplinary partnerships, standardised data collection, co-creation with data collectors & end-users #EpiSky t.ly/gAZKI
From the 100 Day Mission to 100 lines of software development: how to improve early outbreak analytics
Since the COVID-19 pandemic, considerable advances have been made to improve epidemic preparedness by accelerating diagnostics, therapeutics, and vaccine development. However, we argue that it is crucial to make equivalent efforts in the field of outbreak analytics to help ensure reliable, evidence-based decision making. To explore the challenges and key priorities in the field of outbreak analytics, the Epiverse-TRACE initiative brought together a multidisciplinary group of experts, including field epidemiologists, data scientists, academics, and software engineers from public health institutions across multiple countries.
t.ly
Now is the age of #AMR burden estimates - join us to hear from the expert @bugwonk.bsky.social next Thursday at 12.50 for "Rethinking how to understand the burden of antibiotic resistance bacteria (RHUBARB)" @lshtmamrcentre.bsky.social @cmmid-lshtm.bsky.social www.lshtm.ac.uk/newsevents/e...
Rethinking how to understand the burden of antibiotic resistance bacteria (RHUBARB) | LSHTM
A joint seminar between CMMID and the AMR Centre. Speaker will present their research, focusing on evaluating the burden of AMR.
lshtm.ac.uk