Fay Lin

@faylinphd.bsky.social

Senior Technology Editor @ GEN Writing about AI x Bio ✉️ flin@genengnews.com

Altos Labs has taken home the Generalist Prize for the most "well-rounded" model across metrics at @arcinstitute.org's Virtual Cell Challenge! The competition highlights the challenge of defining robust benchmarks for biology. #NeurIPS2025 Read at GEN: www.genengnews.com/topics/artif...

NeurIPS 2025: Altos Labs Wins Generalist Prize at Arc's Virtual Cell Challenge

The inaugural competition surprisingly awarded two $100,000 grand prizes to address challenges in defining robust benchmarks for complex biology.

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AI in Protein Design: Hype vs. Reality Explained by David Baker In this GEN interview, he emphasizes that designing new proteins from scratch is now a reality. Whether AI transforms medicine will require improving our understanding of biology's complexity

AI in Protein Design: Hype vs. Reality Explained by David Baker

In this GEN interview, Nobel Laureate David Baker, PhD, emphasizes that designing proteins from scratch is reality and unpacks what's needed for AI to transform medicine.

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Fantastic free virtual summit 11 am ET today: The State of AI in Drug Discovery Hosted by @faylinphd.bsky.social Speakers include @dereklowe.bsky.social @emmalundberg.bsky.social @bowang87.bsky.social @mollygibson.bsky.social Regina Barzilay … and more! webinars.liebertpub.com/e/The-State-...

The State of AI in Drug Discovery 2025, Wed, Oct 29th, 2025 @ 11:00 AM Mary Ann Liebert, Inc. publishers

Artificial intelligence (AI) and machine learning partnered with big data generation at unprecedented scale is transforming the worlds of biotechnology and pharma, particularly in the arena of drug discovery. From generative AI to unlock novel drug candidates to virtual cells that gleam insights across multimodal biology, we are witnessing the cusp of an exponential curve of AI innovation that is poised to enhance and perhaps overhaul the design and validation of novel therapeutics. In 2024, GEN debuted our virtual summit, The State of AI in Drug Discovery, which drew a record audience. This year’s summit provides a platform for an outstanding group of researchers, evangelists and entrepreneurs to showcase the latest advances, applications and challenges regarding the deployment of AI across therapeutic development. The program features many of the most exciting companies and organizations powering the AI revolution, including NVIDIA, Xaira Therapeutics, Recursion, Chan Zuckerberg Initiative, Arc Institute, Generate: Biomedicines, and more! Please join us on October 29th for a dynamic program featuring: A featured presentation with Bo Wang, PhD (Xaira Therapeutics) on the promise of multimodal AI for health care The democratization of small molecule drug discovery with the developers of Boltz-2, Gabriele Corso, PhD (MIT), Regina Barzilay, PhD (MIT), and Najat Khan, PhD (Recursion) Evolving industry trends across the AI therapeutic landscape with Derek Lowe, PhD (Novartis and author of "In the Pipeline"), Molly Gibson, PhD, (Flagship Pioneering), and Stacie Calad-Thomson, PhD (NVIDIA) Building the virtual cell with Theofanis Karaletsos (Chan Zuckerberg Initiative), Emma Lundberg, PhD (Stanford), Hani Goodarzi, PhD (Arc Institute), and Ron Alfa, MD, PhD (Noetik) What’s next for AI in protein design with Surge Biswas, PhD (Nabla Bio), Tharindi Hapuarachchi, PhD (Generate: Biomedicines), and Oliver Vince, PhD (Basecamp Research) Breakout sessions from our event sponsors, Revvity Signals, Benchling, and Telesis Bio. Registration for The State of AI in Drug Discovery is entirely free. Sponsored by

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David Baker's Nobel Prize-winning lab has now designed a molecular on/off switch to control the speed of protein binding, supporting safer medicines that quell harmful side effects and activate drugs on cue, and sensitive biosensors for SARS-CoV-2 testing! www.genengnews.com/topics/artif...

AI-Designed Protein Switches Control Drugs with Speed

David Baker’s Nobel Prize-winning lab has designed protein on/off switches as a tool for tunable cancer immunotherapies and biosensors.

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BindCraft is now published in @nature.com! The open-source pipeline for de novo protein binder design achieves significantly improved success rates with nanomolar affinity and therapeutic potential from gene editing to allergens. Read more at GEN: www.genengnews.com/topics/artif...

BindCraft AI Model Achieves One-Shot Functional Protein Design

The open-source pipeline designs proteins with improved success rates for therapeutic targets, including gene editing proteins and allergens.

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David Baker's Nobel Prize-winning lab has now designed binders to "undruggable" disordered proteins, unlocking therapeutic access to over 50% of the human proteome! ‪@uwproteindesign.bsky.social‬ Read more at GEN: tinyurl.com/4fw6wvkm

Undruggable No More: AI Hits Disordered Proteins, Unlocks Therapy Targets

David Baker’s lab has successfully designed binders to disordered proteins, expanding therapeutic access to over 50% of the human proteome.

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Xaira Therapeutics has released the largest publicly available Perturb-seq dataset to train the AI-powered virtual cell for drug discovery! The work is described in Xaira's first preprint, capping a year after the company's $1 billion launch. www.genengnews.com/topics/artif...

Xaira Therapeutics Releases Largest Perturb-Seq Dataset to Power the Virtual Cell

The AI unicorn's Perturb-seq atlas is publicly available and detects dose-dependent genetic effects to enhance predictive power for drug discovery.

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Boltz-2 now predicts molecular binding affinity at newfound speed and accuracy - and it's open source! The permissive MIT license allows commercial drug developers to apply proprietary data and offers an advance over the structure prediction capabilities of AlphaFold 3. tinyurl.com/37c96c6y

Boltz-2 Released to Democratize AI Molecular Modeling for Drug Discovery

The MIT model predicts molecular binding affinity at newfound speed and accuracy, offering a powerful tool for commercial drug discovery.

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AI hype or reality - can we design antibodies from scratch (de novo)? In my latest for GEN, I unpack where de novo design is today and how arguments over terminology have clouded the industry’s shared mission of bringing better therapeutics to the clinic faster. tinyurl.com/4uamc8c5

Scratch That? De Novo Antibody Design Enters the AI Drug Discovery Toolbox

Debates over AI antibody design terminology have clouded the industry’s shared mission of bringing better therapeutics to the clinic faster.

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BREAKING NEWS: World’s first patient treated with personalized CRISPR therapy! Born with a severe metabolic disease with a 50% mortality rate, an infant has improved after receiving an individualized gene editing therapy, a glimpse of a new era in genomic precision medicine. tinyurl.com/m52udxht

ASGCT 2025: World’s First Patient Treated with Personalized CRISPR Therapy

Treated with an individualized gene-editing therapy that corrects mutations directly on the genome, a patient shows improvement from a rare metabolic disease.

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Leveraging protein structure prediction tools, researchers from Northwestern University present an #AI based framework to uncover potential structural design rules across receptor families for improved cell therapies. Read more at GEN: www.genengnews.com/topics/artif...

AI-Guided Receptor Engineering to Improve Performance in Cell Therapies

Using protein structure prediction tools, researchers have uncovered receptor structure-function relationships to improve cell therapies.

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EXCLUSIVE: @recursionpharma.bsky.social announced favorable efficacy data in the Phase 2 trial for REC-994, the company’s lead AI-derived candidate to treat the potentially fatal brain disease, cerebral cavernous malformation (CCM). My latest for GEN: tinyurl.com/yc6wspz5 1/

Recursion Announces Promising Clinical Data on Lead AI-Based Drug Candidate for Brain Disease

Cerebral cavernous malformation (CCM) patients treated with oral drug, REC-994, showed reduction in total cerebral and brainstem lesion volume.

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