Today is the only day you can experience Ray Bradbury’s “There Will Come Soft Rains” on the day it is set. Audio: archive.org/details/brad... PDF: thephilosopher.net/bredberi/wp-...
Iddo Friedberg 🏴 𐤏𐤃𐤅
@iddux.bsky.social
Curses back at dimensionality. High throughput, some output.
That's exactly what a stochastic parrot would say.
Rob Patro@robp.bsky.social · 4d agoThe most popularly repeated “stochastic parrot” interpretation (that LLMs merely remix surface text & can't reason or create genuinely new abstractions) is no longer tenable. Novel open-problem solutions with machine-checkable Lean proofs are evidence of systematic generalization, not quotation.1/3
Facing federal science budget cuts, biologist Daniel Blumstein resorted to uploading marmot videos to OnlyFans to raise funds for his marmot research. However, when he uploaded his driver’s license for verification, OnlyFans informed him that his appearance didn’t match the marmots in the videos.
‘OnlyMarms’: Marmots Are on OnlyFans to Raise Money for Research (Gift Article)
A team of scientists uploaded videos of the squirrel-like rodents in the wild on the adult-content site OnlyFans to raise money amid government budget cuts.
nytimes.com
Somebody pitched Universal studio the latest installment in the Jason Bourne franchise. It was called "The Bourne Again Shell". The studio rejected it because the script was deemed too slow and unintelligible.
Matt Damon Jason Bourne
Alt: Matt Damon Jason Bourne
static.klipy.com
If you stick around to the end of #ISMB2026 drop by the Bioinformatics in the USA track Thursday after lunch to hear my talk. Why chickens? Why corn? Why is a plant hormone made by bacteria? What is the difference between Amazon turking and undergraduates? What's with the patriotic tractor?
"Springer Nature was nevertheless still selling the empty PDF for $39.95 until this story was published" www.science.org/content/arti...
Why have papers by one of history’s most famous physicists been retracted?
Springer Nature has removed two studies by Max Planck. A bot may be to blame
science.org
The #OpenSource in the Age of #AI panel will be the second of two panels at #BOSC2026. Find more info, including names and bios of panelists, here: www.open-bio.org/events/bosc-...
BOSC 2026 Panels
For the first time ever, BOSC will include two panel discussions featuring perspectives from across the open science, bioinformatics, policy, and AI landscapes. Panel 1: Policies and Strategies for Re...
open-bio.org
Mónica Muñoz Torres, PhD@monimunozto.bsky.social · 2mo ago📢 Join us for the Open Source in the Age of AI panel at #BOSC2026 (part of #ISMB2026)! Is #generativeAI a force multiplier or a challenge to long-term #sustainability? As code generation accelerates, we'll debate attribution, licensing, and scientific integrity in bioinformatics. 🧵 👇
The Longitudinal Assessment of protein Function Annotation (LAFA) is live! LAFA compares contributed models to each other and to baselines. If you have a model you would like to upload to LAFA, please let us know! FunctionBench.net
Nethack 5.0 dropped last month. I think I'll take a sabbatical.
As I'm going to see the Mandalorian & Grogu tonight, here's my take on the rest of the Star Wars franchise: 1977: the best. Han shot first ESB: Excellent. ROTJ: where things started to go bad.
Congratulations to Dr. Parnal Joshi! Onward to your next adventure!
Want to find #prophage in your #bacteria genomes? We built PhiSpy a long time ago, and now we've created a new web page for it: linsalrob.github.io/PhiSpyWeb/ Best of all, the data never leaves your computer! #phage #phagesky
PhiSpyWeb – Browser-based Prophage Prediction
Browser-based prophage prediction using PhiSpy, Pyodide, and WebAssembly
linsalrob.github.io
Excited to share: Advances in Protein Function Prediction from the Fifth CAFA Challenge. 📈huge increase in participation, due to @kaggle.com 🤔 New "partial-knowledge" score reveals major open challenges 🗨️ Protein language models are driving progress doi.org/10.64898/202...
doi.org
Doodle now have an infinity symbol in their logo, to underscore how long it takes to coordinate a meeting.
I forgot that yesterday was World DNA Day. At least I didn't forget my DNA.
When writing the NIH Current & Pending (CPOS Common Form) via SciENcv it omits the "in kind" section when I try to fill it out. Has anyone else experienced this? Is there a way around it?
Have you developed a new #bioinformatics tool to understand #phage or #virus? Make sure you add it to #awesome-virome github.com/shandley/awe...
Want to annotate a bacterial genome with structures? @oschwengers.bsky.social bakta and @gbouras13.bsky.social phold got together, and the result is Baktfold: protein annotation across the microbial tree of life using structures www.biorxiv.org/content/10.6... #phagesky #microsky #microbiomesky
biorxiv.org
X-post from Bluesky: 🧑💻Satellite Hackathon at #ViBioM2026! Join the #Virus #Bioinformatics + @nf_core Hybrid Collaborative #Hackathon & collaborate on bioinformatic tools and ideas & contribute to reproducible workflows & research infrastructure. Want to […] [Original post on genomic.social]
That's relatively new...
Cybersecurity News Everyday@hendryadrian.bsky.social · 4mo agoGenobank, a US blockchain-based genomic data platform, was targeted by threat actor coinbasecartel demanding ransom to prevent release or encryption of sensitive DNA data, risking severe privacy breaches. #Genomics #DataBreach #UnitedStates
How Not to be Seen: Predicting Unseen Enzyme Functions using Contrastive Learning https://www.biorxiv.org/content/10.64898/2026.02.23.707489v1
Call for the first 2026 round of the OBF Event Fellowship & overview of the overall round of 2025 www.open-bio.org/2026/03/05/e...
Call for the first 2026 round of the OBF Event Fellowship & overview of the overall round of 2025.
The call for applications for round 1 of the OBF Event Fellowship for 2026 is now open. The deadline for this round is 1 April 2026. You can submit your application through this Google Form. We have p...
open-bio.org
"This phosphodiesterase from E. coli has presented us with a poser. We do not know which node on the EC tree it is on. But we will soon find out." How Not to be Seen: Predicting Unseen Enzyme Functions using Contrastive Learning www.biorxiv.org/content/10.6...
biorxiv.org
I love curling. curl -X POST -L -H "Content-Type: application/json" -H "Authorization: Bearer <token>" -d '{"key":"value"}' api.example.com/data -o response.json --verbose
The AI of wordle as a grant reviewer: "This proposal isn’t one of the projects I think will be funded based on what I’ve learned from doing science".