Johannes Debler

@jwdebler.bsky.social

Molecular Biologist / part time Bioinformatician, Nanopore enthusiast, Sci-Fi fiend, Wingsuit pilot

Not sure whether you should submit/register for CBSM 2026 ... aside from our stellar guest speakers, exceptional student presentations and fantastic traders, our catering all included in your registration fee and arranged by the UWA UniClub is reason enough! Submit and register here cbsmwa.au

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Our Frontiers in Genetics breakout session and speakers are locked in for CBSM 2026! Take a look at our keynote and invited speakers who will be discussing topics including bacterial genetics, gene editing, epigenetics and DNA scaffolding and origami.

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🧬 CBSM WA 2026 — early bird rego & abstract submission now open! Breakout sessions spanning plant science, microbiology, cell & dev bio, genetics & biodiversity, plus a great plenary line-up and a networking sundowner to close. WA life scientists, come along 👇 cbsmwa.au

I just recalled some older Nanopore data and started fixing the assembly when I came across a 'weird' contig. Blasting it generated a lot of almost perfect hits to 'plasmids' all across the tree of life. Turns out it was the spike in control DNA that comes with the ONT library prep kit...

Found another instance of my plasmid/virus, this time in sequencing data of Leptographium pseudotsugae, a fungal pathogen isolated from Oregon pine (Douglas fir). We're up to 11 fungal species carrying it. Still no clue what it is 🤷‍♂️

@tobybarilbio.bsky.social and I are very excited to release MycoMobilome! A very extensive effort to discover, QC and annotate TEs across the fungal kingdom. 👉 Ready-to-use for your own genome with a simple tutorial! 👉 Metadata about TEs discovered in your genome! 👉 Contribute and get recognition!

Toby Baril@tobybarilbio.bsky.social · 9mo ago

1/ Ever needed to annotate TEs in a fungal genome, but didn't know where to start? We have released #MycoMobilome, a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom, constructed from >4,000 fungal genomes! www.biorxiv.org/content/10.1...

Join us in our CBSM WA 2025 Biodiversity session with invited speaker Dr James PB Lloyd. His talk will focus on the threat of climate change to our global food security and the potential for programmable genetic systems as a solution.

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