It has been lovely being back in Glasgow this week, giving a keynote talk at the Glasgow Computational Biology conference & an invited seminar at @uofgsii.bsky.social in the Hogwarts building 🏰(thank you @liam-rooney.bsky.social) -both such vibrant research communities & highly enjoyable discussions
Liam Rooney
@liam-rooney.bsky.social
Fellow in Bacteriology, University of Glasgow. 🏴 Microscopist, microbiologist, coffee drinker. He/Him. All views own. 🧫✨🔬
🆕 | @uofgsii.bsky.social's Dr @liam-rooney.bsky.social recently co-organised the UK’s largest and most comprehensive light microscopy training programme, SOMC 2025, bringing together experts and students from around the world for an advanced upskilling course. 👉 More: www.gla.ac.uk/schools/infe...
Great first week at #SOMC25, learning microscopy basics through lectures and practicals. We spent today collecting samples on the Isle of Cumbrae ready for week 2!
After 10 packed days of optical microscopy theory & practicals, #SOMC25 is over! 🌍 24 students from around the world 🧑🏫 19 internationally renowned lecturers 🧑🔧 16 supportive sponsors 🔬 14 hands-on advanced practical sessions 🏆 4 poster & image prizes 🪼 1 field trip to collect marine specimens
Grateful for the chance to speak on computational microscopy and ML/AI in imaging. Thanks for having me! #SOMC25 #Microscopy #AI
Our final lecture on Day 10 of #SOMC25 is on computational microscopy and ML/AI imaging/analysis approaches, delivered by @giudica.bsky.social (@strathbiomedeng.bsky.social).
Our final session at #SOMC25 was a practical workshop on 3D printed lenses - learning how to rapidly fabricate small lenses and spin coat large lenses for optical instrumentation.
Our final lecture on Day 10 of #SOMC25 is on computational microscopy and ML/AI imaging/analysis approaches, delivered by @giudica.bsky.social (@strathbiomedeng.bsky.social).
Our penultimate lecture on the final day of #SOMC25 is on developments and applications of Mesoscale Imaging from @gailmcconnell.bsky.social (@sipbs.bsky.social @unistrathclyde.bsky.social).
Our morning lecture at Day 9 of #SOMC25 is a double act on Raman imaging delivered by @karenfaulds.bsky.social and Will Tipping from @unistrathclyde.bsky.social.
Our second lecture on Day 8 of #SOMC25 was given by Joëlle Goulding (@uniofnottingham.bsky.social) on the theory and practicalities of Fluorescence Correlation Spectroscopy.
Our first lecture of Day 8 at #SOMC25 is on FLIM and FRET imaging, from uses in basic science through to clinical diagnostics, delivered by Simon Poland (@kingscollegelondon.bsky.social).
Day 7 Lecture 2 at #SOMC25 on Expansion Microscopy delivered by @shannanfoylan.bsky.social (@unistrathclyde.bsky.social), featuring some of her own @sulsa.bsky.social funded research on expansion microscopy for ‘footery’ samples.
#SOMC25 Day 7 kicks off with @ralfmbauer.bsky.social (@unistrathclyde.bsky.social) giving a lecture on lightsheet microscopy.
Our Day 6 #SOMC25 afternoon lecture on single-molecule localisation microscopy was delivered by Susan Cox (@kingscollegelondon.bsky.social), followed by rotations around some advanced practicals.
After our morning practical session at #SOMC25, we have our first lecture of the day delivered by @superresolusian.bsky.social (@kingscollegelondon.bsky.social) on STED and super-resolution microscopy methods.
Field trip day at #SOMC25 - we took a trip to the Isle of Cumbrae to collect specimens to image for the rest of the course. Tide pooling, beach combing, diatom netting, copepod fishing, crustacean hunting, and jelly junking. 🌊🪼🦀
Our final activity of #SOMC25 Day 4 is an image analysis lecture and workshop led by @beatricebo.bsky.social from the Cancer Research Scotland Institute.
Our second lecture of Day 4 at #SOMC25 was delivered by me (@uofgsii.bsky.social) covering aspects of live cell and in vivo microscopy.
Saturday morning and Day 4 of #SOMC25 starts with @lemgruber.bsky.social (@uofgmvls.bsky.social @uofgsii.bsky.social) telling us about the most widely used light microscopy methods; widefield epifluorescence and confocal laser scanning microscopy.
Day 3 of #SOMC25 is rounding off with our evening lecture from Bob Edkins (@unistrathclyde.bsky.social) on Fluorescence and Fluorescent Proteins. 🌟🔬
#SOMC25 Day 3 practical session of phase and DIC methods kicks off with a demonstration from Brad Amos before the students will spend time aligning systems for phase contrast and DIC, then imaging various aquatic and marine specimens.
Next up at #SOMC25 is our second lecture of the day from @gailmcconnell.bsky.social (@unistrathclyde.bsky.social) on light source for optical microscopy. 💡🔬
#SOMC25 Day 3 kicks off with our morning lecture from Klaus Suhling (@kingscollegelondon.bsky.social) discussing detectors for optical imaging. 📷🔬
Rounding off the day with Lecture 3 of #SOMC25 with Polarisation, Interference and Diffraction delivered by @muellenbroich.bsky.social, featuring sunglasses-adorned Brewster and a young(er) @ralfmbauer.bsky.social.
Day 1 #SOMC25 practical sessions demonstrating Abbe’s famous experiments followed by hands on alignment and Köhler illumination exercises using a variety of transillumination setups.
Day 2 Lecture 2 of #SOMC25 delivered by David McKee (@physicsstrath.bsky.social) on Ray and Wave Optics. 🌈🔬
Day 2 of #SOMC25 kicks off with Lecture 1 from Brad Amos with an Overview of Optical Microscopy. Starting with the question: does the microscopist need to understand physics?
The Strathclyde Optical Micoscopy Course #SOMC25 kicked off today - 10 days of practical light microscopy training with 24 students from around the world! From fundamental & advanced lectures, to hands-on workshops with high end systems, & a field trip to the Isle of Cumbrae, it will be great! 🔬
🆕 | @uofgsii.bsky.social Bacteriology Research Fellow Dr Liam Rooney (@liam-rooney.bsky.social) was recently recognised with the @microbiologysociety.org Infection Sciences Award, as well as election to the council of the @royalmicrosoc.bsky.social. 🔗 Read more: www.gla.ac.uk/schools/infe...
🌟 Exciting News! 🌟 I’ve been awarded the Infection Science Award by @microbiologysociety.org in recognition of recent work using cross-scale imaging methods to study complex infection models. Thanks to the Microbiology Society, mentors, funders and collaborators for all their support! 🙏🏻🧫🔬🧪