Marcel Ribeiro-Dantas, Ph.D.
@mribeirodantas.bsky.social
👨💻 @Nextflow.io and @nf-co.re Senior Developer Advocate at @Seqera.io 🇪🇸 👨🔬 Former Institut Curie & @Sorbonne-universite.fr 🇫🇷 👨🎓 Former LAIS / HUOL & BioME - UFRN 🇧🇷.
Oportunidade super bacana da comunidade brasileira se encontrar para conversar sobre reprodutibilidade científica e colocar em prática com o Nextflow 😃 #science #ciencia
Less than 1 month to go until the @nf-co.re hackathon in Brazil.💻Join the local Nextflow community in-person on Aug 15-16 to collaborate, connect, and learn from fellow developers. 🎫 Register now: hubs.la/Q04q5Q7j0
Next month, we'll be at #ECCB2026 in Switzerland. Visit us at our booth to meet the team behind @nextflow.io and see live demos of Seqera Platform in action. hubs.la/Q04q4ZCT0
European Conference on Computational Biology (ECCB 2026) | Seqera
The European Conference on Computational Biology (ECCB) 2026 is the premier European event bringing together researchers and industry leaders at the forefront of bioinformatics and computational biolo...
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Beyond static scheduling: meet the new compute engine for the AI era.✨ Seqera Intelligent Compute continuously learns and improves your @nextflow.io pipelines — no manual tuning, no guesswork on instance types. Stop configuring, start optimizing: same pipeline, half the bill.
Join us on August 15-16 for HackNatal 2026, an nf-core Hackathon in Brazil, held as part of the SNNB.🌎 Bring your own topic or choose from open issues in the community. Each project has a lead who can guide you in the right direction: hubs.la/Q04nBcSd0
Hackathon - Agosto 2026
Um hackathon presencial para contribuir com tarefas do nf-core e de seus projetos Nextflow
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Nextflow Ambassadors play such an important role in the growth of the global community.🌎 Nextflow Ambassador Jimmy Lail (@northeasternu.bsky.social) shares his journey toward contributing his very first @nf-co.re pull request. 📚 Read the blog: hubs.la/Q04phxrZ0
From Confused to Contributing: My First nf-core PR Journey | Seqera
What I learned adding DIAMOND-blastp to proteinannotator and what I wish I'd known beforehand. If you're a bioinformatics student thinking about making your first nf-core contribution, this is the pos...
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We're delighted to be sponsoring HackNatal 2026, the @nf-co.re Hackathon in Brazil, taking place August 15-16 as part of the 9th North-Northeast Symposium on Bioinformatics! hubs.la/Q04p8nlN0
Last week, our CEO joined Nebius and leaders from @astrazeneca.com, NVIDIA and Flower AI for a panel on AI in pharma R&D.💊 Key themes: How AI is driving more iterations and better results (not just faster timelines) and reducing reliance on horizontal teams for scientific services.✨
@alloxbio.bsky.social are building scalable experimental and computational platforms to characterize functional protein pockets, identify novel targets, and develop tools for programmable biology and drug development.🧬https://hubs.la/Q04nJWPL0
These hackathons are the best! 🤩
Join us on August 15-16 for HackNatal 2026, an nf-core Hackathon in Brazil, held as part of the SNNB.🌎 Bring your own topic or choose from open issues in the community. Each project has a lead who can guide you in the right direction: hubs.la/Q04nBcSd0
Thrilled to see this official announcement! If the last few months have taught us anything, it’s that advancing AI in the life sciences requires more than just smarter algorithms. It’s about seamlessly integrating those models with the actual tools and daily workflows that scientists rely on.
🚀 Last week, NVIDIA launched BioNeMo Agent Toolkit — tools for agents to accelerate scientific discovery. Alongside Benchling, Databricks, and Snowflake, we're using BioNeMo Agent Toolkit to connect data systems with AI-powered science.✨ Read the press release: hubs.la/Q04nq07t0
Botton-Champalimaud Pancreatic Cancer Centre (@champalimaudf.bsky.social) set out to deconvolve the molecular mechanisms driving pancreatic cancer.🧬 But a small bioinformatics team facing huge computational scale meant infrastructure became a bottleneck. hubs.la/Q04n28g60
This October, join us in Barcelona for #Nextflow Training or the @nf-co.re Hackathon to sharpen your skills and collaborate with the community. Registration is now open ⬇️ 🔸 Training: hubs.la/Q04k3sjz0 🔸 Hackathon: hubs.la/Q04k3w9G0
It's amazing to see how much Nextflow has grown! When I joined Seqera in 2022, there were multiple places around the world who barely had anyone who had ever run Nextflow. It's a totally different scenario in 2026, and it's so nice to have been on board during this trip! 🤩
When Nextflow was first released, the goal was simple: make scientific workflows reproducible and scalable for everyone. 📈 Nextflow is the gold standard for bioinformatics, bringing control and traceability to the volume and velocity of science.
@champalimaudf.bsky.social set out to build a patient-centric multiomics dataset integrating WGS, long-read sequencing, and spatial transcriptomics across 100s of internal samples and 1000s from international cohorts. 📚 hubs.la/Q04jJWTT0
When conducting peer reviews, I increasingly think about the time & workload demands of my suggestions. If there's a flaw that needs correcting, then it needs requesting. But if I just have a preference, something that I think would 'improve the paper', then do I really need to request it?
🎓 Nextflow Training Week has officially wrapped! 700+ participants joined us across introductory and advanced modules to sharpen their Nextflow skills. Ready to earn your certificate? The quiz is now open and available until May 22!🗓️ Get involved: hubs.la/Q04gP2700
2 days. 20+ talks. One incredible community 🌍 All the sessions from #NextflowSummit Boston are now available on-demand! Industry talks from across pharma & biotech, agentic bioinformatics, Nextflow 26.04, Seqera Co-Scientist & more! @seqera.io
Last chance to join. Nextflow Training Week by @seqera.io has officially begun!🚀 Instructor-led videos, live support, and certificates up for grabs. Whether you're just getting started or leveling up, we've got beginner and advanced tracks for you.👉 hubs.la/Q04g2Yz00
And that's a wrap on yet another #NextflowSummit in Boston! What a fantastic week of @nextflow.io Training, @nf-co.re hacking, poster sessions, and incredible talks spanning pharma, biotech, and beyond.
Thank you very much to the folks at Seqera for the opportunity to speak about new adventures in Bactopia. Haha you'll have to wait for the video for the jokes, but for now the slides are available here: bactopia.io/impact-and-o...
Presentations | Bactopia
A curated Collection of Bactopia related Talks and Posters.
bactopia.io
🦠 Avoiding AI slop in Bactopia! Robert Petit from Wyoming Public Health Laboratory is back to share how they took a directed approach to AI coding, building coaching guides, documentation for LLMs, and an "add-tool" skill that lets users contribute new tools to the pipeline. #NextflowSummit
The @seqera.io community team (Geraldine Van der Auwera & Marcel Ribeiro-Dantas) kicked us off with updates from the Nextflow community, including new self-serve Nextflow training and the incredible impact of the Nextflow Ambassador program.🌎
Marcel Ribeiro-Dantas from @seqera.io just gave a recap of this week's @nf-co.re Hackathon at the #NextflowSummit, which included progress across cellpainting, sarek parabricks integration, dragen pipeline initiation, and crispr projects👏
What a day at #NextflowSummit by @seqera.io! From AI-powered pipeline development to production MLOps, GPU-optimized genomics & reproducible bioinformatics at scale, today's talks showed how the industry is pushing scientific computing forward. More tomorrow! 🌇
Introducing Seqera Intelligent Compute, the self-optimizing compute engine that: ✅ Continuously learns from previous runs ✅ Automatically right-sizes resources ✅ Failure recovery without manual intervention 📚 Learn more: hubs.la/Q04dKHBd0
Introducing Seqera Co-Scientist, the intelligent, collaborative partner that brings the full power of Seqera Platform to scientists.✨ From generating pipelines to autonomously executing bioinformatics at scale, Co-Scientist accelerates scientific discovery through 3 integrated capabilities 🧵
Keynote speaker announcement: @tommytang.bsky.social at #NextflowSummit Boston!🎉 Tommy is a computational biologist with 14+ years experience in genomics, epigenomics & single-cell transcriptomics and leads epigenetics bioinformatics for oncology at @astra-zeneca.bsky.social🧬
Based in the UK?📍 Check out these upcoming Nextflow Training Workshops 📅Mar 17 | Introduction to Nextflow by HAB (@kingscollegelondon.bsky.social), with Simon Murray from @genomicsengland.bsky.social 🔗 hubs.la/Q045-Mr_0
Intro to Nextflow with Simon Murray - Hub for Applied Bioinformatics
£25 KCL Staff/Students or £50 external, register on eStore here Instructor: Dr. Simon Murray from Genomics England. This practical session will be an introduction to Nextflow, a powerful computational...
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Less than 1 week to go until the @nf-co.re Hackathon!🌎Join hundreds of participants for 3 days of development and collaboration with the global @nextflow.io community. We're delighted to be sponsoring this community event and can't wait to see what you will build together!👏 hubs.la/Q045R9_h0
🎉 Registration for the nf-core hackathon is now open! Join us online or in-person on March 11-13 for collaborative coding, pipeline development, and community building 💻 Bring your own project or choose from our community issues.🔧 Every project has a lead to guide you! nf-co.re/events/hacka...