All BrainGlobe atlases now have Neuroglancer links so that you can explore atlases in the browser without needing to download them first! All links here: brainglobe.info/documentatio... Here you can view our Eurasian Blackcap atlas: neuroglancer-demo.appspot.com#!https://bra...

If you use the BrainGlobe Atlas API directly (i.e. not through brainreg, brainrender etc), please test out the new version of the API. V3 should be backwards compatible, but we want to catch any bugs before full release.

BrainGlobe@brainglobe.info · 2w ago

Do you use the BrainGlobe Atlas API directly in your work? Have you built a tool on top of BrainGlobe? We will soon release V3 of the API, which changes how brain atlas data is stored and accessed. A release candidate is available for testing, please see our blog: brainglobe.info/blog/atlas-a...

Do you use the BrainGlobe Atlas API directly in your work? Have you built a tool on top of BrainGlobe? We will soon release V3 of the API, which changes how brain atlas data is stored and accessed. A release candidate is available for testing, please see our blog: brainglobe.info/blog/atlas-a...

The Neuroinformatics Unit is going to #FENS2026. Come and chat to us if you're interested in open source neuroscience software!

datashuttle is now published in JOSS! A tool to automate the creation, validation & transfer of standardised neuroscience project folders — GUI or Python API. The GUI works on all operating systems, even remotely via SSH! More details: datashuttle.neuroinformatics.dev #neuroscience #openscience

Journal of Open Source Software@joss-openjournals.bsky.social · 2mo ago

Just published in JOSS: 'datashuttle: automated data management for experimental neuroscience' https://doi.org/10.21105/joss.09642

v0.17.0 of movement released! 🧠🧪 This version includes new path analysis functions along with a number of bug fixes. Importantly there are some small breaking changes, so please read the release notes to see how your code may be affected. More details: github.com/neuroinforma...

As part of this effort, we've just released three new atlases from v2 of the Allen mouse CCF - the brain atlas, fiber tract atlas and developmental brain atlas. Most pipelines have moved to CCFv3, but adding v2 allows atlas comparison and reproducing old analyses. brainglobe.info/blog/ccfv2-a...

BrainGlobe@brainglobe.info · 3mo ago

We've started an effort to bring every 3D (non-human) anatomical atlas that exists into BrainGlobe. Get in touch if there's an atlas we've missed, or you think there's a specific atlas we should prioritise. Read more in our blog: brainglobe.info/blog/the-sys...

Introducing driftplots—a tool for creating customisable, interactive drift maps from Kilosort or @spikeinterface.bsky.social output. Read more: driftplots.neuroinformatics.dev

We've started an effort to bring every 3D (non-human) anatomical atlas that exists into BrainGlobe. Get in touch if there's an atlas we've missed, or you think there's a specific atlas we should prioritise. Read more in our blog: brainglobe.info/blog/the-sys...

Fantastic to see @brainglobe.info recognised. Thank you to everyone who's helped build it, and thank you to the RMS.

Royal Microscopical Society@royalmicrosoc.bsky.social · 3mo ago

We are very pleased to announce Dr Adam Tyson @adamltyson.com of the @sainsburywellcome.bsky.social as winner of the RMS Life Sciences Award. 🙂 🔬 Congratulations Adam! 👏🎖️ Read more about Adam's achievements: www.rms.org.uk/resource/dr-...

Great writeup from our collaborators at UCL Advanced Research Computing on our joint work to make building novel 3D brain atlases faster, more reproducible, and accessible to more labs. 🧠 www.ucl.ac.uk/advanced-res...

BrainGlobe Template Builder

Atlas building is complex and time-consuming. To help the BrainGlobe team meet growing demand, we streamlined the first stage: generating a high-quality, standardised 3D reference template.

ucl.ac.uk

We're very excited about this new collaboration with the @intlbrainlab.bsky.social to build general-purpose systems neuroscience software infrastructure for the community.

International Brain Laboratory@intlbrainlab.bsky.social · 3mo ago

We’re excited to welcome a new cohort of project partners to the International Brain Laboratory (IBL). Advancing open, collaborative neuroscience at scale. Explore the projects: internationalbrainlab.com/projects-new... #Neuroscience #OpenScience #DataScience

A few months ago we held a joint retreat with engineers from @intlbrainlab.bsky.social & @alleninstitute.org. We summarised the discussions from this retreat into concrete next steps of how we will collaborate in the future to build better software for neuroscience. doi.org/10.5281/zeno...

Movement v0.16.0 released! This version now comes with the ability to draw, save, and load Regions of Interest in the GUI, and load_dataset can now automatically detect the source software. See the release notes for more info and a full list of changes: github.com/neuroinforma...

New NIU paper in @currentbiology.bsky.social, in collaboration with @neuroweiler.bsky.social and colleagues at the University of Oldenburg. We built the first anatomical atlas for the Eurasian blackcap. Paper: www.cell.com/current-biol... More details: brainglobe.info/projects/bla...

A migratory bird brain, the Eurasian blackcap, has been mapped for the first time using high-resolution light microscopy. The open-source software tools developed form a foundation for new brain atlases to be built for any species, providing a valuable resource.

Managing neuroscience data just got easier! Datashuttle keeps your research data organised, generating standardised folders and seamlessly transferring data. v0.8.0 is out now and supports Google Drive and AWS storage. Check it out at datashuttle.neuroinformatics.dev

For those who missed the talk: the recording is now available on YouTube: www.youtube.com/watch?v=RUDh...

movement: a Python toolbox for analysing motion tracking data

YouTube video by COST_TEATIME

youtube.com

Last chance to apply for this fantastic workshop! Just before FENS, learn how to analyse neural data from the developers of pynapple and NeMoS.

Flatiron Institute@flatironinstitute.org · 4mo ago

Apply for #FlatironCCN's Neural Data Analysis workshop at #FENS2026 before April 10! Learn more: https://www.simonsfoundation.org/event/ccn_fens2026/ #science #neuroscience

We have three neuroscience research software engineering jobs available at @sainsburywellcome.bsky.social, two joint with the Advanced Microscopy Facility. All positions start ASAP, funded until Sept 2028 in the first instance. Salary £54-64k. More details: neuroinformatics.dev/get-involved

Two weeks left to apply for three research software engineering jobs at the Sainsbury Wellcome Centre. Closing date April 12th, salary £54-64k For more details see: neuroinformatics.dev/get-involved #neuroscience #rse

SWC/GCNU Neuroinformatics Unit@neuroinformatics.dev · 5mo ago

We have three neuroscience research software engineering jobs available at @sainsburywellcome.bsky.social, two joint with the Advanced Microscopy Facility. All positions start ASAP, funded until Sept 2028 in the first instance. Salary £54-64k. More details: neuroinformatics.dev/get-involved

Upcoming talk at TheBehaviourForum.org seminar series. See forum post for details: www.thebehaviourforum.org/t/virtual-wo... Come to see me talk about 'movement', our open-source Python package for analysing motion tracking data.

SWC/GCNU Neuroinformatics Unit@neuroinformatics.dev · 5mo ago

Don't miss NIU Senior Research Software Engineer @nikosirmpilatze.com talking about our Python package for behavioural quantification, movement. April 2nd, 12h30-14h00 CET. Online on Zoom, registration needed: helsinki.zoom.us/meeting/regi...

Don't miss NIU Senior Research Software Engineer @nikosirmpilatze.com talking about our Python package for behavioural quantification, movement. April 2nd, 12h30-14h00 CET. Online on Zoom, registration needed: helsinki.zoom.us/meeting/regi...

BrainGlobe has a new roadmap! Somewhat overdue, the March 2026 roadmap summarises our recent progress, and our priorities for the coming year. Read more: brainglobe.info/community/ro...

The deadline for all these positions is now April 12th. Please do not be put off by the "Senior" in the job title. We have hired people at different career stages into roles at this grade, what matters is whether you can do the job!

SWC/GCNU Neuroinformatics Unit@neuroinformatics.dev · 5mo ago

We have three neuroscience research software engineering jobs available at @sainsburywellcome.bsky.social, two joint with the Advanced Microscopy Facility. All positions start ASAP, funded until Sept 2028 in the first instance. Salary £54-64k. More details: neuroinformatics.dev/get-involved

We have three neuroscience research software engineering jobs available at @sainsburywellcome.bsky.social, two joint with the Advanced Microscopy Facility. All positions start ASAP, funded until Sept 2028 in the first instance. Salary £54-64k. More details: neuroinformatics.dev/get-involved

Version 0.15.0 of movement released! New features include: - Derivation of bounding boxes from pose tracks - Saving and loading of RoIs via GeoJSON - A new example for scaling pose tracks to real-world coordinates Release notes: github.com/neuroinforma... Docs: movement.neuroinformatics.dev

Are you a neuroscientist with great coding skills, or a software engineer interested in the brain? We are recruiting for a research software engineer to help us build pipelines to process weeks of neural and behavioural recordings from freely moving animals. More details: bit.ly/rse-2026a

Do you want to spend the summer being paid to contribute to open source neuroscience software? We are taking part in Google Summer of Code again, offering paid, remote placements to work on one of our tools. Open to (nearly) everyone worldwide. More details: neuroinformatics.dev/get-involved...

Part 3 of my "Trusted by design" blog series is live at neuroinformatics.dev/blog/trusted... Open-source software is public, yet much of the communication around it may happen in private channels. What if communication were radically open—visible to anyone who cares to look?