Newcastle Chemical Crystallography Service

@newcrystle.bsky.social

Providing crystal structure data and analysis at Newcastle University. Updates | Publications | Musings

Check out our new paper on using approximate symmetry to simplify the asymmetric units of crystal structures with a large number of molecules in the asymmetric unit: pubs.acs.org/doi/full/10.... #crystallography #symmetry #chemsky

Close Enough: Approximate Symmetry in Recent Crystal Structures with Extreme Z′ (Z′ ≥ 12)

To further highlight the link between approximate symmetry and homomolecular structures that crystallize with large numbers of molecules in the asymmetric unit (Z′ ≥ 12), the most recent structures of this type have been analyzed, and the approximate symmetry identified. In most cases, when approximate symmetry is considered, a smaller approximate unit cell can be described, where the effective Z′ is lower than that of the original unit cell. For one example, defining an approximate cell was not appropriate, and the approximate symmetry in the structure was hence described using approximate layer and rod groups. Generally, it appears that though the molecules in the asymmetric units of these structures may not be related by crystallographic symmetry, symmetrical relationships appear to be retained as much as possible in cases where the packing is awkward and precise symmetry is not possible. Revealing the link between extreme-Z′ structures and theoretical structures with lower Z′ is of potential use to the field of crystal structure prediction with regard to the prediction of structures where Z′ > 1.

pubs.acs.org

Congratulations to all the Early-stage crystallographers who presented talks at our satellite meeting yesterday! You kicked the BCA off to a great start as always 👏 👏 From contributed talks, to flash presentations and a plenary from Ines Collings there was something for everyone in the community 🎉

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New publication in of a Service side-quest that turned into a nice study of temperature and pressure induced phase transitions: pubs.acs.org/doi/10.1021/... @acs.org #crystallography

Low-Temperature and High-Pressure Phase Transitions in Two 2-Amino-4′-halobenzophenones: Incommensurate Modulation and a Case of Temperature-Induced Twinning

The structures of 2-amino-4′-chlorobenzophenone and 2-amino-4′-bromobenzophenone, previously determined at room temperature in the space group Pna21, have been redetermined at low-temperature revealing two different reversible phase transitions. Additionally, high-pressure X-ray diffraction studies were conducted to allow for a comparison of the behavior of these structures in response to different external stimuli. Variable temperature analyses reveal that 2-amino-4′-bromobenzophenone transitions to the monoclinic space group Pa accompanied by a nonmerohedral twinning. The monoclinic phase exhibits approximate symmetry mimicking that of the supergroup Pna21 but with a metric symmetry that precludes true Pna21 symmetry. The structure of 2-amino-4′-chlorobenzophenone transitions to an incommensurately modulated phase upon cooling. The changes in the structure are attributed to slight conformational variations and a rearrangement of the hydrogen bonding networks in the structure in response to stimuli. The phase transition for 2-amino-4′-bromobenzophenone is classified as second order and a mechanism involving multiple coincident nucleation events is inferred from the conformational change and the incidence of twinning. The transformation of 2-amino-4′-chlorobenzophenone to an incommensurate phase is proposed to arise due to thermal contraction of the structure, which allows distinct competing hydrogen bonding networks between neighboring molecules to evolve.

pubs.acs.org