Paul Sample

@paulsample.bsky.social

Biology x AI and other fun stuff.

Today would be a great day for the AI research community to leave X for good. In your own self interest and for the public perception of AI, take a stand. Unless you agree with using it as a misinformation and propaganda machine, I guess.

Introducing SciArena, a platform for benchmarking models across scientific literature tasks. Inspired by Chatbot Arena, SciArena applies a crowdsourced LLM evaluation approach to the scientific domain. 🧵

Bild

I knew he would do this. I wrote a whole article about how he would do this. I am not surprised he’s undermining vaccination. I know he’s an anti-vaxxer & a predatory crank. And yet…you have got to be fucking kidding me. He’s promoting infant mortality.

Sheryl Gay Stolberg@sherylnyt.bsky.social · last yr.

RFK Jr.'s message to parents of newborns considering vaccination: "Do your own research." Yes, really. w/ @by-cjewett.bsky.social www.nytimes.com/2025/04/29/u...

For decades, the US government has painstakingly kept American science #1 globally—and every facet of American life has improved because of it. The internet? Flu shot? Ozempic? All grew out of federally-funded research. Now all that's being dismantled. 1/ www.technologyreview.com/2025/02/21/1...

The foundations of America’s prosperity are being dismantled

Federal scientists warn that Americans could feel the effects of the new administration's devastating cuts for decades to come

technologyreview.com

How have I been coding with Python for 10 years and just learned today that you can update the same line in a terminal using '\r' and end=''? print(f"\rDownload progress: {percent}%", end='') Thanks Claude.

Super excited to announce our latest work. On a personal note, it's not an exaggeration to say that blood, sweat, and tears got us to the finish line on this: working w/ an outstanding global team of scientists in Germany, Japan, Russia, and USA responding in >100 pages of complex reviewer comments.

Massively parallel characterization of transcriptional regulatory elements - Nature

Lentivirus-based reporter assays for 680,000 regulatory sequences from three cell lines coupled to machine-learning models lead to insights into the grammar of cis-regulatory elements.

nature.com

I'll get straight to the point. We trained 2 new models. Like BERT, but modern. ModernBERT. Not some hypey GenAI thing, but a proper workhorse model, for retrieval, classification, etc. Real practical stuff. It's much faster, more accurate, longer context, and more useful. 🧵

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