Super excited to share our lastest bioRxiv preprint from @mskcancercenter.bsky.social introducing GIFT (Genotyping In Fixed Transcriptomes): Preprint: doi.org/10.64898/202...
Ronan Chaligné
@ronanchaligne.bsky.social
Scientist. Director of the Single-cell Analysis Innovation Lab @MSKcancercenter. sail.mskcc.org - Opinions are my own
🚨🚨 We're hiring! 🚨🚨 The Single-cell Analytics Innovation Lab (SAIL) at @mskcancercenter.bsky.social is looking for a Junior Technician to join our wet lab team! You'll work with spatial genomics and single-cell technologies, helping us push the boundaries of cutting-edge analysis in cancer research.
The Single-cell Analytics Innovation Lab @mskcancercenter.bsky.social is expanding and looking for ML-oriented computational biologists. Join our team based in NYC to work on cutting-edge single-cell & spatial transcriptomics methods in collaboration with leading research labs. bit.ly/4lTEr2t
Computational Biologist (Single-cell Genomics / ML) – Single-cell Analytics Innovation LabChaligne Lab Website
bit.ly
Trying a slightly new model (for us at least) of #openscience. With @ronanchaligne.bsky.social and @karolisk.bsky.social, we pitted 10x Genomics Chromium GEM-X against Illumina PIPseq V head-to-head to understand these two platforms for single-cell genomics. Some thoughts off the bleeding edge: /1
a baby is eating a piece of food while sitting on the ground .
ALT: a baby is eating a piece of food while sitting on the ground .
media.tenor.com
But our work is far from done—science is still under attack. We’ve got ideas, but we want to hear from you. What’s worrying you most? What should we do next? How can we grow this movement together? Fill out this quick form to share your thoughts & stay connected: forms.gle/QAxH4wD4Y3sg...
How do we keep Standing Up for Science?
A heartfelt thank you for everyone that Stood Up for Science with us on March 7th—whether it be volunteering, donating, sharing, or attending in event, we're forever indebted to people like you who ca...
forms.gle
"I've spent over five decades as a scientist in academia and the federal government," Harold Varmus, the former director of the N.I.H., writes in a guest essay. "Never before have I seen my profession so politicized as it is now under the Trump administration."
Opinion | American Science is Under Attack
The Trump administration hobbles research and endangers the public health.
nytimes.com
Out today in @naturegenet.bsky.social -- PERFF-seq! With @tsionabay.bsky.social , @ronanchaligne.bsky.social, Bob Stickels, Meril Takizawa, + Ansu Satpathy, we describe this new assay to study rare populations with programmable nucleic acid cytometry. 1/n www.nature.com/articles/s41...
Transcript-specific enrichment enables profiling of rare cell states via single-cell RNA sequencing - Nature Genetics
Programmable Enrichment via RNA FlowFISH by sequencing (PERFF-seq) isolates rare cells based on RNA marker transcripts for single-cell RNA sequencing profiling of complex tissues, with applicability t...
nature.com
🔬 We’re Hiring! 🧪 The Single-cell Analytics Innovation Lab @mskcancercenter.bsky.social is expanding and looking for Junior Research Technician! Join our team based in NYC to work on cutting-edge single-cell & spatial genomics methods in collaboration with leading research labs.
Single-cell Analytics Innovation LabChaligne Lab Website
sail.mskcc.org