Sam Hemmings

@samhemmings.bsky.social

PhD student | Fisher Lab | Imperial Interested in fungal AMR, genetics, and air quality 🍄

📝 NEW PREPRINT It’s with an immense joy that our preprint is finally out and it’s my first first co-author paper!!! 🧬🍄 What is the diversity of 3D genome architectures in fungi? We reconstructed the 3D genome architecture of public Hi-C data from 55 fungal. Preprint: lnkd.in/enxTh2Cm

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Incredibly happy to share that our work investigating fungal bioaerosol exposure in 118 homes across London has been published in The Lancet Microbe today! A huge thank you to all the co-authors, collaborators, and community scientists who made this work possible. You can find the paper below!

The Lancet Microbe@lancetmicrobe.bsky.social · 2mo ago

New research article Diversity analysis of indoor and outdoor fungal bioaerosols in UK households: a prospective, observational, longitudinal study www.thelancet.com/journals/lan... #IDSky #ClinMicro #MycoSky #OpenAccess #OA

Fungi make so much of life on earth possible—but are too often left out of conservation. That's slowly starting to change. As it does, a cohort of mycologists across Africa are pioneering the study and conservation of fungi in their home countries. My latest: www.theguardian.com/environment/...

‘Without them there is no life’: the race to understand the mysterious world of Africa’s fungi

Amid growing evidence of fungi’s key role in ecosystems and storing carbon, African scientists are championing the need to preserve ‘funga’ as much as flora and fauna

theguardian.com

ggCaller v1.5.0 is out! We've removed the integrated clustering to enable users to benefit from new Panaroo features. Now, ggCaller generates GFFs that can be used with any clustering method. But for fans of an integrated ggCaller pangenome workflow read on... github.com/bacpop/ggCal...

GitHub - bacpop/ggCaller: Bifrost graph gene caller.

Bifrost graph gene caller. Contribute to bacpop/ggCaller development by creating an account on GitHub.

github.com