Théo Dupuis

@theodyssee.bsky.social

Scientist @Genomics. Lurking around here when my feed on mastodon feels too overwhelming

Please share! Fully funded PhD position (UK home fees) at U. of Dundee for someone interested in combining wet-lab (Dr Murdoch) and computational approaches (🙋‍♀️ 2nd supervisor), with plenty of scope for learning new skills across both areas. 🧪🧬 Deadline 21 September

Redox Control of RNA Splicing in Cardiovascular Disease at University of Dundee on FindAPhD.com

PhD Project - Redox Control of RNA Splicing in Cardiovascular Disease at University of Dundee, listed on FindAPhD.com

findaphd.com

New preprint! Our workflow for processing single cell and nuclei data, called 🎉 scprocess 🎉 We have been working on it for ~18 months now, over which time we have processed at least 2k samples with it, so it has had a decent amount of testing.

Cute logo for the package scprocess, showing a cartoon of 3 cells being unpacked from a box labelled with a barcode, and loaded onto a conveyor belt. The colour scheme is purple, dark blue and mustard.
#SingleCell preprints@prepub-singlecell.bsky.social · 8mo ago

scprocess: a pipeline for processing, integrating and visualising atlas-scale single cell data #SingleCell 🧪🧬🖥️ https://www.biorxiv.org/content/10.64898/2026.03.09.710141v1

We're Hiring! Computational Biologist / Genomic Data Scientist. Join our lab to use cutting-edge data & AI/ML to advance human health. - Genetics & Genomics analysis - AI/ML in biology - Solving real-world genomic problems 📄 Full details: docs.google.com/document/d/1...

Job-computational-biologist-2025.docx

Genomic Data Scientist / Computational Biologist We are looking to hire a lifelong learner interested in developing statistical and computational tools to sift through large amounts of data to make di...

docs.google.com

Polygenic scores are useful for early detection, but also early prevention! New paper shows people with high genetic risk of T2D have 3x more risk of developing it by age 35. Early detection could trigger lifestyle changes, metformin prescription... doi.org/10.1038/s414...

Preventing premature deaths through polygenic risk scores - Nature Communications

Via an integrative modelling approach that combines population and clinical trial data, the authors find that polygenic risk score-based screening would reduce premature mortality across seven commonl...

doi.org

Developing type 2 diabetes young+lean is not as uncommon as it may seem. This phenomenon is more common in people of South Asian and East Asian ancestry, but is observed across populations. Why does this happen, how should we screen and treat young+lean T2D. 👉 Read our paper here: rdcu.be/eH0YR

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"L’Etat veut bien accueillir les chercheuses et chercheurs empêchés de travailler aux Etats-Unis, mais pas tous. Les thématiques considérées comme «wokes» ne font pas partie des cibles du gouvernement." Macron est une belle ordure.

Études sur le genre ou les minorités : les scientifiques que la France ne veut pas sauver du trumpisme

Last week to apply for this PhD position my group. 4 years funded position to study genetic and environmental causes of complex human diseases. A fantastic training opportunity for a candidate interested in acquiring skills in data science and clinical data analysis.

Ana Viñuela@anavinuela.bsky.social · 2y ago

We have an open position to do a #PhD in genomics at the University of Dundee (UK). This is a 4 years fully funded position in collaboration with pharma industry in USA. Unfortunately, only for UK citizens or pre- and settle status residents. Please share! shorturl.at/RwaCr

We have an open position to do a #PhD in genomics at the University of Dundee (UK). This is a 4 years fully funded position in collaboration with pharma industry in USA. Unfortunately, only for UK citizens or pre- and settle status residents. Please share! shorturl.at/RwaCr

Interaction of genetic and environmental drivers of metabolic and autoimmune disease at University of Dundee on FindAPhD.com

PhD Project - Interaction of genetic and environmental drivers of metabolic and autoimmune disease at University of Dundee, listed on FindAPhD.com

findaphd.com