Very happy to that our large-scale collaborative weave project (w/ @annamichalik.bsky.social & @sympiotr.bsky.social ) "Plant pathogens in #insect #microbiome [...]" has been approved! @fwf-at.bsky.social @ncn.gov.pl @univie.ac.at @jagiellonskiuni.bsky.social @dome-vienna.bsky.social 1/6 👇🏽
Alejandro Manzano Marín
@amanzanom.bsky.social
Senior Scientist 👨🏽🔬 @dome-vienna.bsky.social, @univie.ac.at 🇲🇽🇪🇺(🇦🇹🇫🇷🇪🇸) Symbionts, bacteria, insects, leeches, viruses, bioinformatics, evolution, genomics. Opinions are my very own. #SymbioSky https://besymblab.univie.ac.at/ https://ecoevo.social/@amanzanom
Intrahost mutational dynamics parallel long-term #genomeEvolution in #endosymbionts by @symboevo.bsky.social & Younghwan Kwak doi.org/10.1093/molb... #SymbioSky
Intrahost mutational dynamics parallel long-term genome evolution in endosymbionts
Abstract. Obligate endosymbionts of insects undergo extreme genome evolution, marked by accelerated molecular evolution, severe base-pair compositional bia
doi.org
A step forward in discovering Buchnera's key to the aphid's heart, published today! Thanks to Jerry Maeda and other authors--a great team -- and to the helpful reviewers #SymbioSky doi: doi.org/10.1038/s415...
A secreted endosymbiont protein essential for colonizing host cells - Nature
SyeA was present in the Buchnera ancestor, is secreted into the host cytoplasm, is homologous to secreted effectors of bacterial pathogens and is essential for Buchnera transmission.
doi.org
Proposed terminology for referring to the homes of #symbionts within their ( #insect ) hosts " #Symbiotic organs in #insects: diversity, functional implications, and terminology " w/ @kaltenpoth-lab.bsky.social and co., not in bsky doi.org/10.1098/rstb... #SymbioSky
Symbiotic organs in insects: diversity, functional implications, and terminology
Abstract. With over a million described species, insects represent the most successful group of animals on Earth. One of the drivers of insect diversity is
doi.org
SypC, a #symbiont #outerMembraneVesicle protein, impacts the development of the #squid – #vibrio partnership doi.org/10.1073/pnas... #SymbioSky
SypC, a symbiont outer membrane vesicle protein, impacts the development of the squid–vibrio partnership | PNAS
Bacterial outer membrane vesicles (OMVs) and the cargo they carry are increasingly recognized as a means of communication between microbial symbion...
doi.org
With Eugene Koonin, we wrote a rather comprehensive review on the origin, evolution and organization of the #virosphere. We describe all 10 viral realms and the logic behind them, and so much more. Check it out! comptes-rendus.academie-sciences.fr/biologies/ar...
#Genome-resolved #metagenomics reveals conserved, flexible and emerging #symbioses across global #leafhoppers doi.org/10.64898/202... #SymbioSky
Just published! Check out our review of the Nucleocytoviricota infection cycle. Great teamwork! @mkrupovic.bsky.social @willemsenanouk.bsky.social @fischerlab.bsky.social @puffy-virus.bsky.social
New online! Infection cycles of viruses of the phylum Nucleocytoviricota
New Work out! A multilayered network reveals the centrality of newly discovered #Nucleocytoviricota in wastewater treatment plant communities w/ @dominikluecking.bsky.social & @amanzanom.bsky.social doi.org/10.64898/202... @erc.europa.eu @univie.ac.at @dome-vienna.bsky.social 1/4
New work out! #Coevolution and synchronized evolutionary rates in #aphid dual #endosymbiot sytems w/ Jess, Emmanuelle, Armelle, & co. doi.org/10.64898/202... @cbgpmontpellier.bsky.social @inrae-france.bsky.social @cemess.bsky.social @dome-vienna.bsky.social @univie.ac.at #SymbioSky #MicroSky
Want to find #prophage in your #bacteria genomes? We built PhiSpy a long time ago, and now we've created a new web page for it: linsalrob.github.io/PhiSpyWeb/ Best of all, the data never leaves your computer! #phage #phagesky
PhiSpyWeb – Browser-based Prophage Prediction
Browser-based prophage prediction using PhiSpy, Pyodide, and WebAssembly
linsalrob.github.io
#gutMicrobiota of Brazilian #Melipona stingless #bees A distinct microbiota architecture retaining a compartment-specific specialization, suggesting an "alternative symbiotic strategy that may reflect unique dietary ecology and evolutionary history." doi.org/10.1371/jour... #SymbioSky
Gut microbiota of Brazilian Melipona stingless bees: Dominant members and their localization in different gut regions
The gut microbiome of eusocial corbiculate bees, which include honeybees, bumblebees, and stingless bees, consists of anciently associated, host-specific bacteria that play crucial role in nutrition, ...
doi.org
Pentapartite symbiotic system in #Legendrea loyezae by @filiphusnik.bsky.social & co. doi.org/10.21203/rs.... #SymbioSky #protistsOnSky
A novel mitochondrion-related organelle and complex endosymbiosis in a rare anaerobic single-celled predator
Anaerobic single-celled eukaryotes illustrate the remarkable diversity of adaptations to life without oxygen, including multiple mitochondrial reductions and various symbiotic interactions with prokar...
doi.org
Interested in working on the evolution of photosynthetic endosymbioses? Come join us! I have 2 open positions in my new group @cemess.bsky.social in Vienna 3yr postdoc info: tinyurl.com/4emkjpn4 4yr PhD info: tinyurl.com/mtxmsjpy Apply by 1st June! Please share/repost #Protists #Symbiosis #PhD
Missed this one when it came out. #Genome degradation results in nested #symbiosis and #endosymbiont replacement in #cicadas doi.org/10.1038/s414... #SymbioSky
Genome degradation results in nested symbiosis and endosymbiont replacement in cicadas - Nature Communications
The evolutionary mechanisms leading to symbiont replacement in insects are not well understood. Zhou et al. show that genome degradation results in nested symbiosis and endosymbiont replacement in cic...
doi.org
Cellular remodeling of ovarian follicular epithelial cells transmits an obligate nutritional #endosymbiont in a #scaleInsect #Insignibacter tubulum, novel nutritional endosymbiont of #Insignorthezia insignis doi.org/10.1073/pnas... #SymbioSky
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
doi.org
Elsevier costs were ~£1.7B in 2025 newsletter.journalology.com/p/elsevier-2... Compare that to arXiv 👇
$7M/year running costs
How common is multicellularity in bacteria? And archaea? And how does it evolve? We wrote a short review "On the architecture and evolution of prokaryotic multicellularity". Preprint link: bit.ly/4ta06Gq Sharing and comments are much appreciated. 1/4
Leeches are so cool! 🤩 We had a special speaker today at @i2sysbio.es , Alejandro Manzano Marin @amanzanom.bsky.social . I have known him since my PhD and I'm really amazed by his research line about symbionts of leeches #symbiosis #microsky
This is a really cool study on one of my favourite obligate symbiotic systems: Aphid + Buchnera by @jerrymaeda.bsky.social, @nancy-moran.bsky.social, & co. A secreted #endosymbiont protein (SyeA, formally Yba3) essential for colonizing host cells doi.org/10.1101/2025... #SymbioSky
Calling all OrthoFinder users! We’ve just released GLADE, a tool to infer gene gains, losses, duplications, and ancestral genomes across a phylogeny. GLADE runs directly on OrthoFinder results. www.biorxiv.org/content/10.6... github.com/lauriebelch/... (1/10)
biorxiv.org
Announcing our next #NSFfunded workshop on "Telling Stories Through Data", co-lead by myself + @vgwschutte.bsky.social! It’s half bioinformatics data viz & half #SciComm - this year’s focus is host-associated microbiome datasets. Apply here to join us (form closes 1/10) bit.ly/TSTD2026 #symbiosky
ChromoMapper: a new tool to quickly compare large genome assemblies. #GenomeAssembly #GenomeComparison #Bioinformatics #Genomics @bioinfoadv.bsky.social 🧪🧬 🖥️ academic.oup.com/bioinformati...
After a long(ish) while, the reference genome for the #leech #Hirudo verbana is officially out! doi.org/10.12688/ope... w/@ergabiodiv.bsky.social, @biogeneurope.bsky.social, @leibnizlib.bsky.social, & @sangerinstitute.bsky.social @dome-vienna.bsky.social, @cemess.bsky.social, @univie.ac.at 1/3..
A new @ergabiodiv.bsky.social - @biogeneurope.bsky.social reference genome is available! 🥳 Have you heard about this European medicinal leech? Hirudo verbana! Learn more about this medicinal leech here 👉 www.youtube.com/watch?v=Mily... @iboleurope.bsky.social @horizoneu.bsky.social
REFEREE 1: “I conclude with a simple, direct statement - this is the best paper I have read all year!” #TransparentPeerReview Co-evolving infectivity and expression patterns drive the diversification of endogenous retroviruses @juliusbrennecke.bsky.social et al www.embopress.org/doi/full/10....
Olvera-Vazquez, @cornilleamand.bsky.social et al. analyzed olfactory and gustatory receptor genes in 12 aphid genomes with varying host plant ranges. Aphid lineages with broader host ranges exhibited higher evolutionary rates. 🔗 doi.org/10.1093/molbev/msaf238 #evobio #molbio
Comprehensive Annotation of Olfactory and Gustatory Receptor Genes and Transposable Elements Revealed Their Evolutionary Dynamics in Aphids
Abstract. Gene duplication and transposable elements (TEs) are major drivers of genomic innovation that can fuel adaptation. While the roles of duplication
doi.org
Last week we wrapped up the first edition of the Virus evolution and ecology course under the umbrella of the brand new Master in Microbiome Science offered @univie.ac.at. We learned about viruses, their evolution, and their ecological impact across different ecosystems. 1/2 #VirEvol
It’s exciting to see converging evidence across systems! 😀 Alongside the new work on gutless worms, our study shows that organosulfur cycling is also essential in lucinid holobionts. Lucinid host provides DMSP to its symbionts, sulphur-oxidising Thiodiazotropha and, a new member, Endozoicomonas.
New preprint! We explore how gutless marine worms and their bacterial symbionts use organosulfur compounds like DMSP and DMS - key molecules in marine sulfur cycling. Our results show that these compounds support carbon and energy metabolism in the Olavius algarvensis symbiosis.
Don’t say that! Every academic will start putting it on their CVs. 🤣
And, do we even care about IQ? It is like the Impact Factor of intelligence...