Brenton von Takach

@certhionyx.bsky.social

ecology. population genomics. threatened species. research fellow at Curtin University in Perth, Australia

New paper showing that oblong turtles hybridise with eastern long-necked turtles in southwestern Australia! doi.org/10.1007/s105...

Oblong turtles hybridise with an introduced congener and display a size-heterozygosity relationship - Conservation Genetics

Freshwater turtles are among the most imperilled vertebrate groups globally, facing compounding threats from habitat loss, climate change, and invasive species. We conducted the first comprehensive range-wide genomic assessment of the oblong turtle (Chelodina oblonga; Indigenous Noongar: Yaakan and Booyi), a species endemic to the rapidly drying biodiversity hotspot of southwestern Australia. To evaluate individual and population genomic structure and diversity, we used reduced representation sequencing to genotype 466 individuals from 60 sites across the species’ distribution. Our results reveal the first evidence of hybridisation in the wild between C. oblonga and the introduced eastern snake-necked turtle (C. longicollis). The detection of putative backcrossed individuals implies that introgression may be actively occurring. Population structure analyses of C. oblonga identified a distinct latitudinal gradient with hierarchical substructure, while genomic diversity was lowest at the northern and southeastern range extremities, consistent with range-edge effects. We also identified a significant positive relationship between linear carapace length and individual heterozygosity. Larger individuals exhibited higher diversity than smaller individuals, suggestive of a heterozygosity-fitness correlation. These findings provide critical genomic data for the oblong turtle as well as highlight a need to monitor the impacts of invasive species in increasingly modified aquatic ecosystems.

doi.org

Best student paper of 2024 winner Kate Rick, along with Brenton Von Takach and Kym Ottewell, discuss the use of genomics in Australian conservation efforts, and their study on the golden bandicoot Find the episode wherever you usually get your podcasts.

The last paper from my PhD, on how historically stable climates have allowed divergent lineages of pygmy perches 🐟🧬(including cryptic species) to persist, was published this week in Heredity: www.nature.com/articles/s41.... Also includes some pretty bleak projections under climate change!

Long-term climatic stability drives accumulation and maintenance of divergent freshwater fish lineages in a temperate biodiversity hotspot - Heredity

Heredity - Long-term climatic stability drives accumulation and maintenance of divergent freshwater fish lineages in a temperate biodiversity hotspot

nature.com

Check out our new article in Nature Ecology and Evolution rdcu.be/dISZk After repurposing genetic and genomic data, we found several shortcomings with current archiving practices. In this paper we discuss file format standards, key metadata, and more, that could improve genetic data reuse-ability

A scientist walking through clouds of genetic data

Thrilled to share our research on a community-driven reintroduction of southern pygmy perch in @theconversation.bsky.social: a great example of how collaborations between government, community, managers and researchers can drive positive conservation outcomes! theconversation.com/how-a-long-l...

How a long-lost fish species was brought back to Bendigo

Reintroducing locally extinct species is a challenging affair, but with the right partnerships everyone can help make it happen.

theconversation.com

Pitcher plant traps have evolved at least six times, with two types found in Australia: the southwestern Cephalotus, which contains just a single species, and the tropical genus Nepenthes, which is represented by a few species (3000 km away!) in far north Queensland

CephalotusNepenthes

First day of new role seems as good as any for a proper introduction, so here goes: I'm Sean, and I'm a lecturer in Molecular Ecology at Edith Cowan University! My research focuses on the application of genetics to conservation management, with a big focus on genetic rescue/mixing.

Collage of three photos. First is a night-time photo of me holding a quenda as part of a monitoring program. Second is a photo of me standing in front of a research poster entitled "Prioritising populations as sources for genetic mixing: guidelines from a simulation framework." Third is a selfie in front of a purple peacock mural for Wear It Purple Day.

For 2024, I'm going to use this flow-chart to prioritise requests to review papers. At the end of the year I'll let you know the numbers in each category. I thought of adding an "am I being paid?" question, but what's the point?

Bild

Recent CA mega-fires killed ~15% of all monarch Giant Sequoias (>4ft diam). Monitoring GS ecosystems helps us to better understand how fire severity, intensity, scale, and our changing climate will affect the continued existence of these pre-historic beings. 🧵(1-4) briefly discusses GS & wildfire 🌎

Monarch giant sequoia in Kings Canyon NP with burn scars and walk-thru catface scarHistoric Nelder Giant Sequoia Grove with 100% tree mortality from 2017 Railroad Fire. GS regen is minimal and in competition w/ ceanothus spp.Red Mountain Giant Sequoia Grove in Kings Canyon NP experienced 100% tree mortality from 2021 KNP ComplexGiant Sequoia seedling recruitment post 2021 Windy Fire (Giant Sequoia National Monument).

Never stops making me mad every time I see it: if we had begun the process of eliminating fossil fuels in the 1990s, it would've been a relatively shallow curve. Climate deniers and delayers have put us in a position where the same temp limits require a cliff-like drop in emissions.

the different curves for reducing emissions