Department of Cell and Tissue Biology at UCSF

@ctbatucsf.bsky.social

Cell and Tissue Biology at UCSF studies fundamental cellular and molecular mechanisms of development, stem cells, regeneration, and disease

Our latest on cancer metabolism by star student Tonatiuh Montoya @ctbatucsf.bsky.social @ucsfcancer.bsky.social Liver cancers driven by the MYC oncogene are reliant on alanine metabolism. Alanine is the second most abundant amino acid and can partially substitute for glucose and glutamine. 🧪

Alanine Catabolism as a Targetable Vulnerability for MYC-Driven Liver Cancer

Liver cancer is a leading cause of cancer-related death world-wide in part due to the shortage of effective therapies, and MYC overexpression defines an aggressive and especially difficult to treat su...

biorxiv.org

Check out outstanding grad student Daphne Superville @dasuperville.bsky.social update of DECIPHER-seq package for NMF analysis of single cell sequencing. She is currently using this approach to analyze breast metastasis-specific gene programs.

Daphne Superville@dasuperville.bsky.social · last yr.

Running NMF on your scRNAseq data? Check out my updates to Lyndsay Murrow's DECIPHER-seq package, now compatible with Seurat v5 objects and rliger v2! github.com/dasuperville...