DSMZ Digital Diversity

@dsmzd3.bsky.social

The home of digital resources of the DSMZ (@leibniz-dsmz.bsky.social), including BRENDA, SILVA, LPSN and BacDive. Visit hub.dsmz.de

❓How much data is in BacDive? 👉BacDive currently contains ✨more than 3 million✨ distinct data points, which describe 101,417 prokaryotic strains 🦠 of 22,480 different species 🧫.

An infographic describing how many data points for different categories BacDive contains.

📢 The BacDive summer release is online! What is new: 🔹 Updated information on strains available in the Jena Microbial Resource Collection (JMRC) 🦠 and a new JMRC Special Collection 🔹Recalculated BacteriaNet genome-based predictions 🧬 🖥 🔹Links to Enterobase 🧫 👉 bacdive.dsmz.de/news/41

Screenshot of a strain header showing links to the new JMRC collection and to Enterobase

💬“LPSN is a key source of information on the nomenclature of prokaryotes and associated data – it helps researchers stay informed about the constantly proposed new bacterial names.” #LPSN 🦠 is our newest #ELIXIR core data resource 🥳. If you are not using it yet, check it out now 👉 lpsn.dsmz.de

lpsn.dsmz.de

Leibniz Institute DSMZ@leibniz-dsmz.bsky.social · 7mo ago

LPSN becomes an ELIXIR Core Data Resource! This database tracks bacterial names, aiding scientists worldwide. Easier microbe research ahead. Press release: tinyurl.com/fuud42xk #ScienceNews #Microbiology #Innovation #BioData

✨With this update, #BacDive additionally receives a new look 🖥️. The new website, which had been in beta test phase for the last six months, adopts the shared modern design of @dsmzd3.bsky.social, which offers users an intuitive navigation and more clearly structured strain detail pages.

The first BacDive website in 2012 and the current design.

🧬 #BacDive is also taking a long-awaited leap into the world of genomics with the debut of a genome browser 🔎🖥️. For the first time, BacDive now displays genomic information. The genome browser feature lists and visualizes #Bakta annotations of #INSDC genome assemblies.

The new genome browser tool.

This year's #BacDive workshop will take place on 24th November 2025, 3 - 5 PM CET online! We are especially looking forward to the opportunity to answer your questions, and hear your feedback and ideas. 🦠🧬. Write to training@bacdive.de to receive the Zoom login details 🖥️.

Agenda: 
1. Introduction
2. The new website design
3. The new genome browser