Are you an ecologist/evolutionary biologist looking for an ongoing academic position? Monash University’s School of Biological Sciences is hiring! Come join us in Melbourne, Australia! Details here: careers.pageuppeople.com/513/cw/en/jo...
Erin Harvey
@erinharvey.bsky.social
Alexander von Humboldt fellow at @ FLI 🇩🇪 | virus emergence and evolution | pathogen discovery | metagenomics and bioinformatics | 🇦🇺 living abroad
Our review on the role of metagenomics in the future of One Health is now published in One Health Outlook @eddieholmes.bsky.social link.springer.com/article/10.1...
Empowering One Health with metagenomics - One Health Outlook
In an increasingly connected world a global One Health approach to the management of human, animal and ecosystem health will be critical to effective infectious disease responses. The emergence and ra...
link.springer.com
Truly bizarre story of how two papers from the 1940s by physics pioneer Max Planck have been "retracted" from Naturwissenschaften, potentially by an algorithm, for anachronistic "plagiarism" issues, leaving the current editor baffled (but it is Springer Nature so.... www.science.org/content/arti...
Why have papers by one of history’s most famous physicists been retracted?
Springer Nature has removed two studies by Max Planck. A bot may be to blame
science.org
Teams in the Democratic Republic of the Congo & Uganda have now shared the first sequences from the current Ebola (Bundibugyo virus) outbreak using Pathoplexus, just days after cases were confirmed. Read more about the response to Bundibugyo virus here: pathoplexus.org/news/2026-05...
Pathoplexus | Ebola: Rapid response to the Bundibugyo virus outbreak in the DRC and Uganda
Pathoplexus is a new, open-source database dedicated to the efficient sharing of human viral pathogen genomic data, fostering global collaboration and public health response.
pathoplexus.org
🏗 Working on virus #bioinformatics tools or data curation? Interested in building lasting, open-source workflows? 🛠 Join the satellite #hackathon at #ViBioM2026, online or in Vilnius! 👉 More information and registration until 8 May: evbc.uni-jena.de/events/vibio...
Applications are now open for the 2026 Metagenomic Virus Discovery workshop in Stellenbosch, South Africa Last years workshop brought together a fantastic community of researchers and our teachers were able to provide one-on-one support to each participant Find out more at mvdworkshop.com
📣 Fully funded travel scholarships available for researchers and scientists residing in Africa 📣 Applications are open until April 30th for a 5 day hands-on workshop in virus metagenomics in Stellenbosch, South Africa Find more information on our website: mvdworkshop.com @ceri-news.bsky.social
Applications are open for the 2026 Metagenomic Virus Discovery Workshop! The Centre for Epidemic Response and Innovation, Stellenbosch University is hosting a 5 day hands-on workshop run by experts in the field from around the world Find out more at our website mvdworkshop.com
Our discovery of novel viruses in invasive camelids in Australia leads us to propose a simple idea: RNA viruses may repeatedly evolve functional modules at the 5′ end of their genomes. #Virology #RNAvirus #VirusEvolution #Picornavirus #VirusDiscovery doi.org/10.64898/202...
doi.org
Phionah Tushabe was the winner of our poster prize! Her study used metagenomics to identify viruses in stool of patients with non-polio acute flaccid paralysis. She not only had a beautiful poster but did a fantastic job of presenting her project. We can’t wait to see her work in the future!
Day 4 of the metagenomic virus discovery workshop is all about phylogenetics and virus evolution! Thanks to Eduan Wilkinson, Jackie Mahar and @spyroslytras.bsky.social @ceri-news.bsky.social
This morning we’re starting bright and early with a hands on tutorial in handling large sequencing output and designing a virus discovery pipeline
The advanced metagenomics for virus discovery workshop is underway in South Africa. Participants from 20 countries, global South such as Argentina, Brazil, Cambodia, Kenya, Uganda, Senegal, and Ghana, collaborating with expert teams from CERI, Karolinska Institutet, Germany, Australia, Japan
Today, we start one of the most advanced virus discovery & metagenomics workshop in the world in Stellenbosch. Experts from Australia, America, Brazil, Cambodia, China, Italy, Nederlands, Japan, U.K and Sweden come together to teach participants from 20 countries.
Day 1 of the metagenomic virus discovery workshop is underway with lectures on project planning. Fantastic to have teachers and participants from 20 countries here together in Stellenbosch
The Metagenomic Virus Discovery workshop kicks off bright and early on Monday morning in gorgeous Stellenbosch, South Africa. We hope our participants are ready for a week packed full of insightful lecture and practical sessions with our panel of experts from around the world
Join us in the Neeslie Cinema, Stellenbosch University, on Wednesday 19th November at 14:00GMT (16:00 SAST) for the MVD workshop keynote. We have two fantastic talks from Dr Maja Vukovikj from Uppsala university, Sweden and Dr Erik Karlsson from Insitut Pasteur, Cambodia tinyurl.com/ytj3sppm
Just over one month until we welcome our teachers and participants from all around the world to beautiful Stellenbosch, South Africa, for five days of hands on metagenomic virus discovery sessions
Research assistant + postdoc position on a NERC funded project working w @darrenobbard.bsky.social and collaborating with @savebutterflies.bsky.social on the ecological and evolutionary drivers of the virome of UK moths @uniexecec.bsky.social. Descriptions below and links here benlongdon.com/join/
Just under 6 weeks until the metagenomic virus discovery workshop kicks off in Stellenbosch, South Africa. We're excited to be bringing together a fantastic group of speakers and teachers with expertise in all aspects of virus discovery from around the world.
✨ #MicroSeq2025 Plenary Highlight! ✨ Dr Jackie Mahar is an evolutionary virologist & bioinformatician based at CSIRO, managing projects on NGS-based phylogenomics of zoonotic & animal viruses for pathogen discovery, surveillance & viral ecology. Register👇 trybooking.com/events/landing/1424679
📣Calling Australian/NZ ECRs and PhD Students 📣 Abstract submission and registration for MicroSeq2025 opens July 21! Abstracts for both medium-length and lightning talks will be welcome.
Got a great idea for a metagenomic virus discovery project but not sure what to do next? We are running a 5 day hands on workshop in beautiful Stellenbosch, South Africa with experts from around the world. Applications are open until 31st July. climade.health/2025/06/22/m...
Interested in metagenomic virus discovery but don't know where to start? In collaboration with CERI and a group of virus discovery experts from around the world, we'll be running a 5 day hands-on workshop in virus discovery. Find out more here: climade.health/2025/06/22/m...
I’m so excited to finally have this work published. Fantastic work from @julienmelade.bsky.social culturing a virus identified through metagenomic virus discovery methods
First isolation of a mammalian chuvirus, bizarrely from Tasmanian Devil facial tumour cells. Work led by @julienmelade.bsky.social and @erinharvey.bsky.social. www.sciencedirect.com/science/arti...
I'm thinking of organising a meeting on endogenous viral elements (RNA, DNA and retroviral) - if you'd potentially be interested, please fill out the form here - forms.gle/wrCiWMw4yXZe... - so I can gauge interest. Please RT or share with anyone maybe interested! 🧪🧬🖥️🦠 #virology #bioinformatics
EVE Meeting Expression of Interest
forms.gle
After just short of nine years in the Holmes group, it’s come time for me to move on and stop spending Eddie’s money. I’ve had an incredible time working with everything from Antarctic ticks to Brazilian bird poo. But I’m excited to be starting a Humboldt fellowship and joining FLI in Germany
We would love feedback on a new NCBI-BLAST service we are launching today: sky-blast.com Under the hood it's the same BLAST executable and databases provided by NCBI, with a replica of the NIH's interface - providing an alternative to the US gov service that's less congested, faster & more reliable
The first measles death in the US in a decade -- the tragic, preventable death of a child whose parents chose not to protect them with vaccination -- should spark an immediate nation-wide campaign to ensure all children are protected against preventable diseases. Anything less is unconscionable.
I know all the headlines about the recent Japanese Encephalitis death in NSW state “a man from Sydney” but please keep in mind that there is currently no evidence the virus is active in mosquitoes along the east coast (inc. Sydney). https://www.health.nsw.gov.au/news/Pages/20250225_01.aspx
News - NSW records first death of person with Japanese encephalitis since 2022
NSW Health continues to urge the public to be vigilant and take precautions against mosquitoes as NSW records its first death of a person with Japanese encephalitis (JE) since May 2022.
health.nsw.gov.au