📢#postdoc offer in Organic chemistry (2 years) in the Environmental chemistry team of Pierre-Loïc Saaidi Mission : Synthesis, Chemical modification, Degradation and Molecular recognition of #PersistentOrganicPollutants : #Chlordecone @cea.fr @univparissaclay.bsky.social @univevry.bsky.social

#Joboffer #CNRS CPJ computational biology in our unit. Deadline for submitting your application is July 14. See details below. Come to join us! @univparissaclay.bsky.social @cea.fr @genopole.bsky.social

UMR Génomique Métabolique@genoscopeumr.bsky.social · last yr.

📢 #Joboffer! We are seeking candidates in bioinformatics/computational biology for a CNRS Tenure-Track position (Junior Professor Chair) for Modeling and Learning from Protein Function to Microbial Communities www.sfbi.fr/emplois/offr... @univparissaclay.bsky.social @cea.fr @genopole.bsky.social

Congratulations to @jpjarnoux.bsky.social who just achieved a major milestone by successfully defending his thesis! 🎓✨ Welcome to the world of doctors! #AcademicLife #ProudPI #pangenomics @genoscopeumr.bsky.social‬ @univparissaclay.bsky.social @cea.fr @univevry.bsky.social

Thrilled to announce the successful defense of the Habilitation à Diriger des Recherches (HDR) by Violette Da Cunha! 🎉📚 Congratulations on this well-deserved achievement! #AcademicLife #Archaea @genoscopeumr.bsky.social‬ @univparissaclay.bsky.social @univevry.bsky.social

We're on the lookout for a talented Software Development Engineer to join our team permanently at CEA and work on the MicroScope platform! 🚀💻 If you're passionate about software development and ready for a new challenge, we'd love to hear from you. @genoscopeumr.bsky.social‬ @cea.fr ‪

🔔 New ERGA–@biogeneurope.bsky.social reference #genome for Dendarus foraminosus, a darkling beetle endemic to Crete 🇬🇷 🔗 Read the #GenomeReport: open-research-europe.ec.europa.eu/articles/5-173 #Crete #biodiversity #genomics #beetle #conservation @genoscopeumr.bsky.social @genolage.bsky.social

📢 #Joboffer! We are seeking candidates in bioinformatics/computational biology for a CNRS Tenure-Track position (Junior Professor Chair) for Modeling and Learning from Protein Function to Microbial Communities www.sfbi.fr/emplois/offr... @univparissaclay.bsky.social @cea.fr @genopole.bsky.social

📢 #Joboffer! We are seeking candidates in bioinformatics/computational biology for a CNRS Tenure-Track position (Junior Professor Chair) for Modeling and Learning from Protein Function to Microbial Communities www.sfbi.fr/emplois/offr... Join us! @cnrsbiologie.bsky.social @univevry.bsky.social

🎉New sampling expedition of #ATLAsea with the implication of Caroline and Janaina from our labs #MarineBiodiversity

ATLASea@atlasea.bsky.social · last yr.

This week, ATLASea is in the Endoume marine station from @univ-amu.fr for a new sampling expedition focused on fish and some additional species! The team has already collected 30 new species. In the lab, our colleagues Caroline, Janaina and Morgane sampling tissues from a coral. #MarineBiodiversity

📢#joboffer. #CDD #ingénieur en génie mécanique (12 mois) pour travailler au développement d'une plateforme pour l'évolution des micro-organismes. Expertise requise en fluidique et en automatisation matérielle pour concevoir des systèmes fluidiques précis. www.emploi.cea.fr/offre-de-emp...

📢 #PhD and #postdoctoral positions available in Pedro Oliveira lab. We seek candidates for Microbial Genomic and Epigenetic teams to work on #epigenomics of #bacteria and #microbiomes. Start: Fall 2025. Please RT! @cea.fr @univparissaclay.bsky.social @genopole.bsky.social @upcite.bsky.social

If you are or will work on Long-read transcriptomics, do not miss this comprehensive course organized by the @longtrec.bsky.social consortium. All what you need to know, from reads to biological insights!!! @pacbio.bsky.social @nanoporetech.com @iscb.bsky.social www.earlham.ac.uk/events/long-...

Long-reads Bioinformatics Summer School

A bioinformatics summer school on analysis of long-reads technology data, hosted by the Long-reads TRanscriptome European Consortium (LongTREC).

earlham.ac.uk

📢Come to join us ! We are looking for a enthusiastic #phD in #bioinformatics using #LLM to work on #pangenomics in @genolabgem.bsky.social team. Fully funded phD Apply before April 27th. @univparissaclay.bsky.social @upcite.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social

LABGeM@genolabgem.bsky.social · last yr.

We're offering a fully funded PhD to work on new methods for microbial #pangenomics using #LLM in collaboration with @guigau.bsky.social and Christophe Ambroise. labgem.genoscope.cns.fr/2025/03/17/f... Apply before April 27th. @genoscopeumr.bsky.social @cea-paris-saclay.bsky.social

We're offering a fully funded PhD to work on new methods for microbial #pangenomics using #LLM in collaboration with @guigau.bsky.social and Christophe Ambroise. labgem.genoscope.cns.fr/2025/03/17/f... Apply before April 27th. @genoscopeumr.bsky.social @cea-paris-saclay.bsky.social

#StandUpForScience2025 Nous exprimons notre inquiétude sur les libertés scientifiques et la désinformation organisée. Soutien solidaire au mouvement Stand Up For Science @univparissaclay.bsky.social @cnrsbiologie.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social

CEA@cea.fr · last yr.

#StandUpForScience2025🔬| Le CEA exprime son soutien au mouvement Stand Up For Science. Nous sommes solidaire des chercheurs américains et de ceux exerçant aux Etats-Unis, qui vivent aujourd’hui des événements susceptibles d’entraver leur indépendance et leur liberté scientifiques.

#Communiqué 🗞️ Le CNRS exprime sa solidarité avec les scientifiques exerçant aux États-Unis, où la liberté académique est aujourd'hui mise à l’épreuve. 👉 www.cnrs.fr/fr/presse/le...

L’Inserm est solidaire du mouvement Stand Up For Science presse.inserm.fr/cest-dans-la... #StandUpForScience2025

L’IRD soutient le mouvement #StandUpForScience et l’ensemble de nos partenaires scientifiques dans le monde. Face aux grands défis mondiaux, la science a un rôle central pour le développement social, environnemental et économique des sociétés, et nécessite une coopération internationale renforcée.

#Joboffer: CDD CEA TECH expérimenté/ING(10 mois, début mai) Mission : mise au point de tests enzymatiques en microplaques pour le criblage enzymatique (CAZymes) Expertises solides en biochimie et biologie moléculaire @univparissaclay.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social

🎉Congrats to Angélique D’Hont #CIRAD and #Genoscope teams. Comparative & phylogenetic analyses reveal an ongoing speciation process within Musa, characterised by large chromosome rearrangements and centromere differentiation. Read : rdcu.be/ebGRK @cea.fr @univevry.bsky.social @jm-aury.bsky.social

Unravelling genomic drivers of speciation in Musa through genome assemblies of wild banana ancestors

Nature Communications - Hybridizations between different wild species and subspecies within Musa genus lead to the origin of current banana cultivars with different ploidy level and constitution....

rdcu.be

🧬📢 The functional adaptations highlighted in our last publication, help us to understand how extremophiles can respond to environmental changes and how ecosystems react to climate change. Read : doi.org/10.1093/isme... @ericpelletier.bsky.social @cea-paris-saclay.bsky.social @univevry.bsky.social

Shotgun metagenomics reveals the flexibility and diversity of Arctic marine microbiomes

Abstract. Polar oceanographic regions are exposed to rapid changes in temperature, salinity, and light fields that determine microbial species distribution

doi.org

Nastasia J. Freyria@njfreyria.bsky.social · last yr.

Our last paper is out: "Shotgun metagenomics reveals the flexibility and diversity of Arctic marine microbiomes" @universitelaval.bsky.social @ismepublications.bsky.social @genoscopeumr.bsky.social doi.org/10.1093/isme...

🏔️ New ERGA - @biogeneurope.bsky.social reference genome for Androsace saussurei: www.biorxiv.org/content/10.1... The #genome will shed light on plant adaptation to extreme alpine environments and the speciation of high-altitude "sky island" flora @osug-fr.bsky.social @genoscopeumr.bsky.social

🎉😀🐠🧬Our teams are proud to be part of this huge and challenging adventure through the Genoscope sequencing platform and our researchers deeply involved ! Follow Patrick Wincker, Jean-Marc Aury (@jm-aury.bsky.social) and Pedro Oliveira teams @CNRS @cea-paris-saclay.bsky.social @univevry.bsky.social

CNRS Biologie@cnrsbiologie.bsky.social · 2y ago

🌊🔬 ATLASea : bilan exceptionnel en 2024 ! Plus de 1000 espèces marines collectées lors des campagnes océanographiques du PEPR ATLASea en Nouvelle-Calédonie, à Dinard, dans la Manche et en Guadeloupe ! 🐠🦑 🤝 @atlasea.bsky.social @cea.fr ➡️ Plongez dans cette aventure scientifique

🎉See C versions of Arima Genomics mapping pipeline tools (htslib library). These tools are designed to efficiently process & analyze HTS sequencing data, particularly for Hi-C & other chromosome conformation capture experiments. github.com/Genoscope-LBGB/arima_htslib #bioinformatic #genomic #Hi-C

GitHub - Genoscope-LBGB/arima_htslib: Performance-critical parts of the Arima mapping pipeline written in C with htslib

Performance-critical parts of the Arima mapping pipeline written in C with htslib - Genoscope-LBGB/arima_htslib

github.com

Jean-Marc Aury@jm-aury.bsky.social · 2y ago

For those working with Hi-C data and the Arima workflow, we have rewritten the Arima tools using htslib to speed up the process. Any feedback is welcome: github.com/Genoscope-LB...

👍Congrats to L. Janniere, N. Sarica and B. Jester from #Synovance. Their model is suggesting that DNA looping is an important cause of context sensitivity and can be used for better controlling the transcription of engineered circuits. #syntheticbiology #AppliedMicrobiology www.mdpi.com/3171930

Towards a Better Control of Engineered Circuit Transcription in Bacterial Genomes

The transcription of genes and engineered circuits can deeply vary when inserted into different genomic loci. This unpredictable performance, termed context sensitivity, complicates strain development...

mdpi.com

🌞 New Publication from Valérie Pezo "Cys-tRNAj, a 2nd Translation Initiator for Priming Proteins with Cys in Bacteria". Optimized tRNAj to recode the priming of an arbitrary subset of proteins with absolute control of their expression. #xenobiology #syntheticbiology DOI: 10.1021/acsomega.4c08326

Proud of Alaksh Choudhury, #ATIGE funding program from Genopole since 1 year. He presents his work at Genopole Research Day on "High throughout navigation of regulatory sequence space and it’s application in strain engineering" #syntheticbiology @genopole.bsky.social @univevry.bsky.social @cea.fr

Andrew Tolonen, Fermentation team leader in our Unit, is chairman today of Bioproduction session at Genopole Research Day. He has received ATIGE funding from Genopole® for 3 years to consolidate his team #syntheticbiology #fermentation @genopole.bsky.social @univevry.bsky.social @cea.fr

PEPR ATLASea an exciting and challenging project that will embark our researchers and the Genoscope sequencing platforms into unexplored genomic landscapes for years !! ATLASea is leaded by Patrick Wincker (CEA) and Hugues Roest Crollius (CNRS) @atlasea.bsky.social @cea.fr

ATLASea@atlasea.bsky.social · 2y ago

📢 The ATLASea Scientific Advisory Board meeting took place at Maison de l'Océan in Paris over the past 2 days. A big thank you to all SAB members for their active participation, valuable insights, and dedication to advancing the project and to #Institut_Océanographique for the meeting room!

👍 Congrats to Andrew Tolonen team for their review on Lachnospiraceae, a family of anaerobic bacteria in the class Clostridia with potential to advance the bio-economy and intestinal therapeutics. 10.3389/fbioe.2023.1324396 @univevry.bsky.social @cea-paris-saclay.bsky.social @genopole.bsky.social