Can you run sequential slurm arrays with one job submission? E.g., make bam files for all inds, then make individual VCFs when bam step is complete. I currently do this with separate job submissions, but would like to combine into one job submission. Thanks! #bioinformatics

Loved that Walkman 💞

Obsolete Sony@obsoletesony.com · 2y ago

2000s 🤍🧡

Phylogenetics methods announcement: piqtree is out! It exposes selected IQ-TREE2 capabilities within Python, using the cogent3 library as the interface, better enabling pipelines. piqtree is an addition to, not a replacement of, IQ-TREE2. Full announcement at github.com/iqtree/piqtr...

piqtree: IQ-TREE2 meets Python via cogent3 · iqtree piqtree · Discussion #145

The developers of IQ-TREE2 and cogent3 have joined forces to bring the power of IQ-TREE2 to Python users as piqtree. piqtree exposes selected IQ-TREE2 capabilities within Python, using the cogent3 ...

github.com

If you hate statistics like I do, then you'll love my free lectures. Putting science before statistics, 20 lectures from basics of inference & causal modeling to multilevel models & dynamic state space models. It's all free, made with love and sympathy. 🧪 #stats www.youtube.com/playlist?lis...

Trump says he's wants to privatize USPS because it's "unprofitable". Reminder that the Post Office isn't a for-profit enterprise: it's a public service that guarantees everyone in America reliable, affordable, and universal mail service.

More Perfect Union@moreperfectunion.bsky.social · 2y ago

BREAKING: Trump says his team is looking into the privatization of the Postal Service.

Gahhhhhhh!!! ☺️🥳🤩 This is an exciting start to the week 😎

Alex Holt@alexjholt.bsky.social · 2y ago

A little late to draw, but the winner of my first ever Bluesky Art Draw is.... @lcampillo.bsky.social! Thank you so much to everyone who entered, I'll probably be running another one next time I hit a milestone! 🙂

People: don’t you just get a job when you’re a doctor…? You can just be a professor, right? Me: 👇🏼

Whoop whoop back to 1000 followers, so you know what I haven't done in ages? ART GIVEAWAY! If you follow me and reskeet this post and at 5pm next I'll do either a creature illustration or a character bust of your choice! *Note: Bot, AI, NFT, scraper etc accounts will disqualified disqualified

We have a postdoc position available in the lab on post-copulatory barriers in hybridizing crickets. We have genomic data ready to be analyzed and crickets ready for experiments. This is a great collaborative group and a study system with a lot of potential for new projects. Join us!

After lots of delay - we just updated the MIT living wage in our stipend database and we are back to only two points above the line! See more: rhettrautsaw.app/shiny/Biolog... #PhDStipend #Biology @reptilerhett.bsky.social

How much more can he take from us

Bugs, Yaoist@bugsmaytrix.bsky.social · 2y ago

elon musk i am in your walls

Tapping the wisdom of the SkyMind. I’ve previously developed educational programs in genomics and bioinformatics at the graduate level, as well as undergrad data science program, and now building a broad PhD program in biomed/biological/bioengineering data science. #science #evolution #genomics 1/1

This is an amazing resource for students, teachers, and researchers alike! Thanks for all your hard work creating and maintaining this, Graham 😎😊🤩 #popgen

Graham Coop@gcbias.bsky.social · 2y ago

Just posting this to #popgen Here's a link to my notes on population & quantitative genetics: github.com/cooplab/popg... Hoping to extend it more after the winter holidays, as I'm just finishing up teaching the undergrad version of class.

I had been off all social media for months, but since humanity is imploding at an ever increasing rate and I’ve heard we’re all gathering here to mourn its demise… I’m back, baby!✌🏼

I think if a conference presentation abstract gets accepted as a poster (i.e., not a talk), you should get a $50 gift card to cover printing costs… 🧪 ps: I think giving posters is ultimately more fun and results in more interaction, but they’re still a pain to design and get printed

Eclipse [yada yada] totality [blah blah] 🤩

Does this place care about real trucks? Or was that only in the other place, the “cyber truck” place…?

Italian wall lizard (Podarcis siculus) Just seven of these were introduced to a backyard in LA in 1994 - now there hundreds of thousands spreading across the city. This 🦎 has also been introduced to San Diego, Topeka, Victoria, and the Bronx. If you see one of these in North America, let me know!

What in the fresh hell?! Seen on Reddit, with the headline: “Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻‍♂️

What in the fresh hell?! Seen on Reddit, with the headline: “Explore Passion and Stars in The Adventures of Rosalind Franklin: A 3D Sci-Fi Adult Visual Novel” 🧪📓🤷🏻‍♂️

Amazing scenery above the clouds on my flight from Hilo to Honolulu over the weekend 🤩📸🌅

As previously stated, you can’t stop worm!

Luke Campillo@lcampillo.bsky.social · 3y ago

“CANT STOP WORM”

Another Elsevier paper with obvious AI-written text. “In summary, the management of bilateral iatrogenic I'm very sorry, but I don't have access to real-time information or patient-specific data, as I am an AI language model. “

People: how does ADHD really impact your life…? Me:

So I play rugby with people who are mostly in their 20s, and I’m in my 30s. Today I came out of the match early and one guy was like “are you okay? What did you injure?!” And another guy was like “Luke’s just old. He’s fine, just old” 👴🏼💀😂 I have become the old man on the team. Life is complete.

OMG! My figure making game is going to be through the roof! 🧪

Internet Archive@archive.org · 2y ago

The 90s are back! Relive the decade with this publicly available version of popular drawing software, Kid Pix! As featured in our monthly collections highlight email: mailchi.mp/archive.org/...

I’m thinking I’ll start a petition to get Brian to bring lemon glaze cookies to the next SSB standalone meeting. Like this post if you agree!

These two songs just came on back to back on shuffle. If you get the significance of that, let’s be friends. If not, go watch Nacho Libre.

Probably the best practical advice I’ve seen on here 🤣

Shepherd@neolithicsheep.bsky.social · 2y ago

DO NOT LIGHT YOUR GROIN ON FIRE WITH 80 YEAR OLD CHEMICAL WEAPONS