Andreas Schaefer

@andreas-t-schaefer.bsky.social

Neuroscientist @crick.ac.uk asking how information is processed in the brain. Odours. Circuits. Neurotechnology. Synchrotrons. BCIs. Co-founder Paradromics Twitter: @AndreasTSchafer

From @bdpedigo.bsky.social: a super efficient, highly reliable, and very generalizable method for mesh structure classification, applied here to spine detection across basically every synapse onto a cell in the MICRoNS dataset.

Mesh analysis pipeline showing feature extraction and spine classification.
bioRxiv Neuroscience@biorxiv-neursci.bsky.social · 6mo ago

A quantitative census of millions of postsynaptic structures in a large electron microscopy volume of mouse visual cortex https://www.biorxiv.org/content/10.64898/2026.02.19.706834v1

Here's a spotlight article on our recent study! Tissue ultrastructure can be resolved with X-rays, which impacts not only how we can study neuronal circuits but soft tissues more generally. Kudos to Ana Diaz, @adrianawanner.bsky.social, @andreas-t-schaefer.bsky.social and all authors.

Imaging spotlight: Revealing mouse brain ultrastructure using non-destructive X-ray tomography - FocalPlane

Imaging spotlight: Revealing mouse brain ultrastructure using non-destructive X-ray tomography - News

focalplane.biologists.com

FocalPlane @focalplane.bsky.social · 7mo ago

🔬🔦Our latest ‘Imaging spotlight’, by @carlesbosch.bsky.social, Ana Diaz, @adrianawanner.bsky.social & @andreas-t-schaefer.bsky.social, highlights the non-destructive X-ray tomography pipeline that the authors developed to map mouse brain ultrastructure & considers future applications & developments.

By repurposing a radiation-hard epoxy resin from the nuclear/aerospace industry, we made samples withstand >1.15×10¹⁰ Gy and reached sub-40 nm resolution, revealing axons, dendrites, mitochondria and synapses without sectioning.

X-rays can resolve ultrastructure - milestone for ultrastructure imaging w/o cutting. Thanks to an amazing team - @carlesbosch.bsky.social @adrianawanner.bsky.social Ana Diaz and collaborators @crick.ac.uk @psich.bsky.social and @esrf.fr and funders @wellcometrust.bsky.social @ukri.org

Carles Bosch@carlesbosch.bsky.social · 8mo ago

#paper! X-rays can resolve #ultrastructure in tissues non-destructively. www.nature.com/articles/s41... Shoutout to key collaborators at @crick.ac.uk and @psich.bsky.social Ana Diaz, @adrianawanner.bsky.social and @andreas-t-schaefer.bsky.social, and to the whole team that made this possible.

Enthusiastic about connectomics and X-rays? Several positions in our group at Crick for postdocs and senior scientists (permanent!). DM me if interested – and let’s talk if you are at Sfn next days or at the NIH BRAIN CONNECTS meeting today! Please share!

Very excited to continue our amazing collaboration with @apacureanu.bsky.social at @esrf.fr - thank you @wellcometrust.bsky.social and all the collaborators at @crick.ac.uk and @esrf.fr

The Francis Crick Institute@crick.ac.uk · 10mo ago

Congratulations to @andreas-t-schaefer.bsky.social on receiving a £3.8 million @wellcometrust.bsky.social Discovery Award, working with @esrf.fr, to chart the brain circuity behind the sense of smell in mice. www.crick.ac.uk/news/2025-10...

Judging by the last ones, this will be amazing - and with all the new developments at next gen synchrotrons, even more timely. Please re-post, join in person if you can travel to London or via zoom

Carles Bosch@carlesbosch.bsky.social · 10mo ago

Join us *next Monday*! #CrickXrays25 X-ray #nanoimaging of biological tissues 🇬🇧🌐 @crick.ac.uk & online tinyurl.com/crickxrays25 Sponsored by @dectris.bsky.social, @webknossos.org and @biologists.bsky.social and backed by @brukercorporation.bsky.social and Histomography

The Molecular Brain Mapping group at the MRC-LMB is hiring! 🌈🧠 I'm looking for people who are excited about developing multimodal analysis and visualization tools to capture the "hidden connectome," in a highly intersectional environment exploring ideas in meta-science. mrc.tal.net/vx/mobile-0/...

Imaging Data Engineer - Neurobiology - Dr Sven Truckenbrodt - LMB 2697 - Medical Research Council

Location: Cambridge. Vacancy: Imaging Data Engineer - Neurobiology - Dr Sven Truckenbrodt - LMB 2697. Closing Date: 09/10/2025, 23:55

mrc.tal.net

Lots of exciting clinical PhD projects at Crick - including the opportunity for neurosurgeons to work with us and record electrical activity in patients with neuropixels probes. Please share widely!

The Francis Crick Institute@crick.ac.uk · 10mo ago

We're looking for clinicians who are passionate about research to join our 3-year fully funded clinical PhD programme. 🔬🩺 Apply by 14 November 2025. 👇 www.crick.ac.uk/careers-stud...