Not sure how to visualise your connectome data? Check our latest led by @m-gajwani.bsky.social & C Adamson on NeuroMarvl: an open source web-based platform for visualising and sharing connectomes! Paper: tinyurl.com/2t7ftu9d Software: tinyurl.com/yrv3xja3 @nsb-lab.bsky.social
AJ Simon
@ayejaysimon.bsky.social
Neuroscience PhD candidate at Yale Brain networks, cognition, psychiatry Constable Lab NSF GRFP fellow @Neuroscapeucsf alum Twitter: @ayejaysimon
Excited to announce that my paper on modeling individualized disordered circuit patterns and linking them to clinical phenotypes is now up on Biorxiv! www.biorxiv.org/content/10.6...
Running therapy is linked to the reorganization of large-scale brain dynamics in individuals with affective disorders, and this reorganization is linked to symptom improvement.
Running therapy reorganizes dynamic brain networks linked to symptom improvement in affective disorders
Exercise therapy reduces depressive and anxiety symptoms, but its neural mechanisms remain unclear. We examined whether running therapy reorganizes dynamic brain functional connectivity in affective…
biologicalpsychiatrycnni.org
Had a great time presenting some of my work on modeling individual specific disordered brain circuits at #OHBM2026! It was great to see everyone and I’m looking forward to next time already
Thoroughly enjoyed participating in the French-American doctoral exchange program in precision psychiatry hosted by the INSERM a couple weeks ago. Looking forward to staying in touch with everyone I met and forming new collaborations
"AI amplifies whatever is already there. Good discipline becomes great output. No discipline becomes technical debt at machine speed. Anthropic chose a direction. Go faster. Have Claude check Claude. And when it breaks, go faster still." substack.com/home/post/p-...
Claude Code's Source: 3,167-Line Function, Regex Sentiment
Anthropic claimed 100% of Claude Code is AI-written. A source leak exposed a 3,167-line function, regex sentiment analysis, and 250K wasted API calls daily
substack.com
🚨 New preprint alert! 🚨 Transdiagnostic latent factor models of psychopathology are widely assumed to improve brain-behaviour associations. So we decided to test this directly and found that they don't. A short 🧵 Link: www.biorxiv.org/content/10.6... 1/10
fMRI connectivity is dominated by recurring high-amplitude BOLD events (CAPs, QPPs) But what originates these events? Many think neuromodulation is the culprit. Our new work offers a simpler take: cortico-cortical dynamics alone can generate CAP-like events! doi.org/10.1371/journal.pcbi.1013995 🧵1/n
Music Ensemble: a large dataset on musicianship, cognition, and personality in musicians and nonmusicians | Scientific Data www.nature.com/articles/s41...
Music Ensemble: a large dataset on musicianship, cognition, and personality in musicians and nonmusicians - Scientific Data
Scientific Data - Music Ensemble: a large dataset on musicianship, cognition, and personality in musicians and nonmusicians
nature.com
It's important to note that when discussing brain structure-function relationships across scales, that the definition of function changes with scale. Keep it straight! @sbe.bsky.social link.springer.com/article/10.1...
Anatomic & functional brain atlases: connecting functional flexibility with fixed infrastructure - Brain Structure and Function
Brain Structure and Function - Recent advancements in imaging across scales has propelled the development of anatomic brain atlases reflecting a wide range of cellular properties. It’s...
link.springer.com
Very cool!
🚨Do we need a large, expensive MRI scanner to map whole-brain networks in the mouse? Not necessarily! In our new preprint ▶️ tinyurl.com/3a2h4r9f we show that transcranial functional ultrasound (fUSI) can map connectome-scale networks with striking agreement to fMRI 🧵👇
I wrote an perspectives piece relevant to the structural atlasing endeavors. Structural atlases are not the end of the story. This perspective calls for models that take into account the flexible functional organization within this fixed architecture. www.frontiersin.org/journals/neu...
Frontiers | Structure–function relationships across scales: implications for atlases
Neuroscience aims to understand how the structural and functional organization of the brain relates to behavior. Structural studies at the cellular level est...
frontiersin.org
Great talk/conversation!
I’m happy to report that the Grand Plan for brain/mind research is in good hands at Yale with @wutsaiyale.bsky.social & co. They offered up many inspired thoughts about the impactful next steps for brain research and I left optimistic about the next steps for the field.
The Two Faces of #PTSD: Fear vs. Emotional Pain. Our new research in Biological Psychiatry @biologicalpsych.bsky.social identifies distinct clinical & neural profiles. AI says no one reads long papers, so we made an infographic!👇 Full Paper (for the insistents😉): doi.org/10.1016/j.bi...
As we chase whole-brain signatures of cognition with fMRI, this fascinating perspective argues that cognitive signals are broadly distributed...but far from everywhere! For those of us using whole-brain neuroimaging lots to think about.. 👇 www.nature.com/articles/s41...
How distributed is the brain-wide network that is recruited for cognition? - Nature Reviews Neuroscience
Both localized and distributed views on the functional organization of the brain have been put forward. In this Perspective, Rosen and Freedman examine the degree to which these two views account for ...
nature.com
Congrats on getting this published in Biomedical Signal Processing and Control @tifenpan.bsky.social! Here, we showed that signals from frontal EEG channels predicted emotional states while listening to music, but other channels and peripheral physiological sensors did not improve model performance.
When more is not better: Predicting human emotional states with brain and bodily biosensors
Recent technological advances have made wearable biosensors increasingly accessible, affordable, and sensitive, driving their widespread adoption for …
sciencedirect.com
Excited to see this paper out in Biological Psychiatry! It highlights that emotional pain and fear represent distinct PTSD dimensions, leading us closer to identifying PTSD subtypes with dissociable biological underpinnings. Congrats on leading the charge on this cool study @zivbenzion.bsky.social
Dissecting Fear and Emotional Pain in PTSD: From Symptom Networks to Neural Signatures
Posttraumatic stress disorder (PTSD) is a heterogeneous condition with diverse symptom presentations and emotional experiences. While fear is traditio…
sciencedirect.com
Multivariate environmental exposures are reflected in whole-brain functional connectivity and cognition in youth | bioRxiv www.biorxiv.org/content/10.1...
Great piece by @natolambert.bsky.social on the current state of human exhaustion in the AI world. Makes this important point:
A new essay on the crazy, all or nothing approach to work happening in AI today, the looming human costs, and the lack of a finish line. I wouldn't say it's okay, but I'm not sure how to fix it. www.interconnects.ai/p/burning-out
BOLD signal changes can oppose oxygen metabolism across the human cortex | bioRxiv www.biorxiv.org/content/10.1...
Excited to share our new preprint! We conducted a spatial meta-analysis of community violence and mental health, synthesizing 155 articles (k = 769) to test how exposure to community violence is associated with mental health problems, and how state social service investments moderate the link. 💵
The role of state social service spending in moderating mental health outcomes of community violence: a spatial meta-analysis: https://doi.org/10.31234/osf.io/zr94j_v1
Really cool interdisciplinary study! www.researchsquare.com/article/rs-7...
Cross-species mapping of psychedelic gene expression reveals links to the 5HT2A receptor, cortical layers, and human accelerated regions
Psychedelic drugs exert rapid and profound effects on human consciousness and are increasingly explored for their clinical potential. Yet, the genetic programs through which psychedelics reshape brain...
researchsquare.com
Excited to share our new paper entitled Multisystem Environmental Factors Elucidate Shared and Distinct Associations With Brain and Behavior in Adolescents. Link: www.jaacap.org/article/S089.... @kavliatyale.bsky.social
thrilled to share our preprint on false memories in naturalistic recollection! Distinct paths to false memory revealed in hundreds of narrative recalls paper: doi.org/10.31234/osf... w/ phoebehc.bsky.social (co-first) Vy A. Vo @davidpoeppel.bsky.social @toddgureckis.bsky.social thread below 👇
Why do brain networks vary? Do these differences shape behavior? If every 🧠 is unique, how can we detect common features of brain organization? @rodbraga.bsky.social and I dig in, in @annualreviews.bsky.social (ahead of print): go.illinois.edu/Gratton2025-... #neuroskyence #psychscisky #MedSky 🧵👇
Dense Phenotyping of Human Brain Network Organization Using Precision fMRI
The advent of noninvasive imaging methods like functional magnetic resonance imaging (fMRI) transformed cognitive neuroscience, providing insights into large-scale brain networks and their link to cog...
go.illinois.edu
Couldn’t agree more. It’s easy to blame the “other” side for not trusting scientists, but to begin to repair these fractures it’s our responsibility to step up and be leaders and engage with the community
A thought-provoking piece in Nature Neuroscience by many neuroscience colleagues: "Science must break its silence to rebuild public trust". Lots to think about here. www.nature.com/articles/s41...