Dear microbiome enthusiasts: I'm excited to be moving my lab to New York University this fall (& the NYU Institute for Engineering Health); with joint-appointment @isbscience.org I'm hiring a postdoc @ NYU to look at diet-driven evolution in the gut: apply.interfolio.com/189980 Please share! 🦠🤓

New preprint! 🧵 Best #Cercozoa genome alert! For a decade, I’ve studied protist ecology through questions like who eats whom. But beyond “they eat this, they eat that,” what do #protists do to their environment, biochemically speaking? #protistsonsky @huesnaoeztoprak.bsky.social

So happy to share our new paper out now in @natmicrobiol.nature.com! We establish Pirsonia-Coscinodiscus as a model pathosystem and uncover how this tiny parasite infects and kills bloom-forming marine diatoms 🌊🦠 rdcu.be/fuQyF

If you want to read a cool story today, look no further: A billion-year-old bacterial machinery replicates plastid DNA and supports kleptoplastidy #protistsonsky www.biorxiv.org/content/10.6...

The deadline for this project has been extended to June 9th as overseas applicants are now eligible! Looking for a fully funded studentship and a healthy mix of bioinformatics, imaging, and fieldwork? Get in touch!

Corey Holt@coreyholt.bsky.social · 4mo ago

GOOD NEWS! Our BRILLIANT Red-ALERT CDT (@redalertcdt.bsky.social) has funding for one more home studentship at the University of Bath so we're re-advertising this project! New deadline: May 18th Come explore protist and invertebrate diversity with us!

We are looking for candidates to fill a PhD position in Grenoble, France. Please share with anyone interested in microbial symbioses! #dinoflagellate #symbiosis www.linkedin.com/posts/johan-...

PhD position available in the team (Cell and Plant Physiology Lab) in Grenoble, in close collaboration with Prof Patrick Keeling from Univ. of British Columbia (Canada), Liz Cooney (Photosymbiosis… | ...

PhD position available in the team (Cell and Plant Physiology Lab) in Grenoble, in close collaboration with Prof Patrick Keeling from Univ. of British Columbia (Canada), Liz Cooney (Photosymbiosis tea...

linkedin.com

And now it's out! Happy that PNAS selected for the cover this SEM image snapped by @samjlord.bsky.social, one of the most evocative visualizations of Euplotes that I have ever encountered. www.pnas.org/doi/10.1073/... Stay tuned for what is shaping up to be some fascinating follow-up in the lab...

Ben Larson@blarson.bsky.social · 11mo ago

What could be more exciting than watching Euplotes scurry around under the microscope? How about adding some raptorial predation by supergiant cannibal cells? www.biorxiv.org/content/10.1... Video by Vittorio Boscaro. 1/n

Not a bad spot for the Holt lab’s first plankton tow!

Just a few days left to apply! Looking forward to reading your applications!

Corey Holt@coreyholt.bsky.social · 4mo ago

GOOD NEWS! Our BRILLIANT Red-ALERT CDT (@redalertcdt.bsky.social) has funding for one more home studentship at the University of Bath so we're re-advertising this project! New deadline: May 18th Come explore protist and invertebrate diversity with us!

Interested in working on the evolution of photosynthetic endosymbioses? Come join us! I have 2 open positions in my new group @cemess.bsky.social in Vienna 3yr postdoc info: tinyurl.com/4emkjpn4 4yr PhD info: tinyurl.com/mtxmsjpy Apply by 1st June! Please share/repost #Protists #Symbiosis #PhD

Our ExM Atlas of eukaryotes is moving along with more and more images coming in - some featured in nature last month! Culture we’re provided by @ccapoban.bsky.social & Julius Lukeš during visits last year www.nature.com/immersive/d4...

See the intricate worlds of parasites and algae — March’s best science images

The month’s sharpest science shots, selected by Nature’s photo team.

nature.com

GOOD NEWS! Our BRILLIANT Red-ALERT CDT (@redalertcdt.bsky.social) has funding for one more home studentship at the University of Bath so we're re-advertising this project! New deadline: May 18th Come explore protist and invertebrate diversity with us!

Corey Holt@coreyholt.bsky.social · 7mo ago

If you're interested in biodiversity in freshwater ecosystems, there's just a few days to apply for our PhD project: Ecological Surveillance using High-Throughput Quantitative Imaging at @uniofbath.bsky.social . Deadline: January 16th! Apply: is.gd/svXBcr Image: www.planktoscope.org/how-it-works

Saving this for our new undergraduate microbiome unit. Would recommend! Thank you, @merenbey.bsky.social and Iva.

A. Murat Eren (Meren)@merenbey.bsky.social · 4mo ago

How every layer of science's "self-correcting machinery" failed when Iva Veseli and I simply wanted to reproduce the findings of a high-profile study on gut microbiome and autism: merenlab.org/2026/04/15/u...

Attending Protistology Open? Check out @nicolecoots.bsky.social & I's ISOP-sponsored symposium "The Symbiotic Continuum across the Tree of Life" (April 20th @ 11 AM)! We have an amazing lineup of speakers including Ondřej Pomahač, @mixotrophe.bsky.social, & Gillian Gile #ProtistsOnSky #Symbiosis

Are you looking for a Post-doc related to biodiversity? We might have just the role for you! @anthropocenebio.bsky.social are curently advertising 10 (yes!) post-docs covering natural & social science of biodivesity. Come work with us & share with anyone appropriate! sites.google.com/york.ac.uk/l...

LCAB Postdoctoral recruitment

The Leverhulme Centre for Anthropocene Biodiversity (LCAB) is a major research centre funded by the Leverhulme Trust to increase knowledge of how the relationship between humanity and the natural worl...

sites.google.com

If you want to be part of this movement and make your own automated 3D microscope—sign up by TOMORROW and join us in #Roscoff in June for "Smart DIY Microscopy for Marine Biology" www.sb-roscoff.fr/system/files... 🤖🔬🌊 @sbroscoff.bsky.social @gdrimabio.bsky.social @embrc-france.bsky.social

Nessa Carson@supersciencegrl.co.uk · 4mo ago

How to make your own robot! A review of people making awesome lab robots out of commercial 3D printers. Thank you @vsaggiomo.bsky.social and Sander for inviting me to help write this paper in @digital-discovery.rsc.org. Beep boop! 🤖 #chemsky doi.org/10.1039/D5DD...

Two weeks left to apply for our Master’s Programme “Microbiome Science” at @cemess.bsky.social | @univie.ac.at! Explore microbial communities shaping health, the environment, and ecosystems. Application Deadline: April 7 All Details: studieren.univie.ac.at/en/degree-pr...

A parting gift 🎁

Aerobic sister lineage of breviates has gene-rich mitochondrial genomes #microbiology #eukaryotes #mitochondria #protists #MicroSky #ProtistsOnSky @cellpress.bsky.social www.cell.com/current-biol...

Aerobic sister lineage of breviates has gene-rich mitochondrial genomes

Cho et al. describe a novel, aerobic sister lineage of Breviatea using flow cytometric single-cell sorting and genome amplification. The new lineage harbors gene-rich mitochondrial genomes, unlike Bre...

cell.com

Excited to announce our new journal from @isme-microbes.bsky.social ISME Host Microbe is live and now accepting submissions. Look forward to receiving your papers! #Microsky 🧫 🦠

So you are using IQ-TREE to estimate a tree for "deep time" phylogenetics using amino acid alignments. There is a lot of confusion about how to test model fit. Here are some suggestions.

Love this paper. Covered the preprint with our final year undergraduates just a couple of weeks ago! Congratulations, all!

Thibaut Brunet@thibautbrunet.bsky.social · 5mo ago

Final version @nature.com of our paper describing unconventional multicellular development in a choanoflagellate inhabiting an extreme environment. A ton of new data since the first @biorxivpreprint.bsky.social preprint (which we've kept updating). A brief 🧵 (carried over from the old place)

We’re recruiting new Research Group Leaders! We offer: 🔬 Core funding 💻 Access to world-leading infrastructure 👩🏽‍🔬A network of world-leading scientists …and much more. Apply by 11 April: embl.wd103.myworkdayjobs.com/en-US/EMBL/j... #ResearchCareers #Bioinformatics @timcoorens.bsky.social @embl.org

🤩 Woahhh! Sounds like a blast! Not to be missed!

John Burns@burnsajohn.bsky.social · 5mo ago

Protist lovers: Please apply for a week of rhapsody! Learn by doing: MicroSEA (Microbial Sea Eukaryotes) course is a one-week, field-based summer school to train early-career researchers in the diversity, ecology, and single-cell biology of marine protists. opbc.sciencesconf.org #protistsonsky

Great to see this paper in all its glory online: link.springer.com/article/10.1... A huge effort from Gordon and the team at @pjkeelinglab.bsky.social! Phylogenomic tree of Cercozoa based on single-cell transcriptomes from 100 uncultured cells @ubcbotany.bsky.social @science.ubc.ca

Phylogenomic tree of Cercozoa based on single-cell transcriptomes from 100 uncultured cells - BMC Biology

Background Cercozoa are single-celled eukaryotes (protists) and are part of the supergroup Rhizaria. Cercozoans have vastly different morphologies and are defined by their phylogenetic affinity. While...

link.springer.com

Be part of OMGN! Open to all researchers with an interest in oomycetes, from molecular genetics & genomics to biology, population biology, and ecology, at either an experimental or a computational level. Investigators new to the field are always welcome oomycetes.com

Some more generative aRt for your eyeballs. You'll have to imagine the birdsong... 🌷geom_meadow

Have a novel protist's genome or transcriptome and want to predict it's mitochondrial proteome? Look no further than CoMR, this handy bioinformatic workflow to help you: www.biorxiv.org/content/10.6... #phylogenetics

New postdoc position available in the Tooke lab in our department. Perfect if you like molecular microbiology, structural biology and biochemistry! www.jobs.ac.uk/job/DQP592/p...

Postdoctoral Research Associate at University of Bath

Searching for an academic job? Explore this Postdoctoral Research Associate opening on jobs.ac.uk! Click to view more details and browse other academic jobs.

jobs.ac.uk

🗣️Protist friends! I'm looking to put together a list of key protistology resources for new students joining the lab. What are some of your favourite papers??? 🧪 #protistsonsky