Susie Wopat

@suewop.bsky.social

👩‍💻NICHD K99/R00 fellow 🔬Postdoc researcher in the Streichan Lab at UCSB, PhD with the Bagnat Lab at Duke 🧬 Cell and developmental biologist endeavoring to integrate quantitative approaches from Physics 🐟Zebrafish enthusiast

What’s inside the black box of cis-regulatory control? Our new review proposes a conceptual framework for understanding how regulatory inputs are integrated, linking molecular mechanisms to sequence constraints and quantitative rules, across scales.

James Briscoe@jamesbriscoe.bsky.social · 3w ago

New commentary from the lab - can we identify principles of transcriptional regulation & cis-regulatory element (CRE) control of gene expression? With @jcornwallscoones.bsky.social & @joadelas.bsky.social in @cp-molcell.bsky.social A thread 🧵 doi.org/10.1016/j.mo...

Our work is finally out! How do organs get the right shape and size on time? Using the zebrafish inner ear canal, we show that a mechanical feedback loop between the ECM and Yap1 drives timely tissue growth, and a built-in termination system shuts it down once morphogenesis is done.

A self-limiting mechanotransduction feedback loop ensures robust organ formation - Nature Communications

Developing tissues must acquire the correct shape. This study shows that mechanical feedback between the extracellular matrix and Yap sustains timely tissue growth, while Adgrg6 terminates the feedbac...

nature.com

BREAKING NEWS The 2026 Nobel Prize in Physiology or Medicine has been awarded to Karl Deisseroth, Peter Hegemann and Georg Nagel “for their discoveries concerning light-gated ion channels and optogenetics.”

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🧬 Preprint! 🧵 Our goal is to genetically manipulate every embryonic germ layer to enable high throughput in vivo studies. We previously showed mouse ectoderm can be targeted by amniotic injection, enabling cell-specific manipulation, lineage tracing, and knockouts. But how to reach mesoderm?

Schematic of method developed and application. At embryonic day 7.5, a lentiviral library carrying unique 30-nucleotide barcodes and a fluorescent reporter is injected into the mouse exocoelomic cavity. An E8 embryo cross-section shows that this cavity is continuous with the intraembryonic coelomic cavity, allowing the virus to reach and barcode mesodermal progenitors, including lateral plate and paraxial mesoderm.

The Brantley Lab is hiring a Research Technician/Lab Manager! Looking for someone with a strong foundation in molecular biology, a team player, and excited about basic science. If you know someone who would be a great fit, please share! spartantalent.uncg.edu/postings/35995

Research Lab Technician

The Brantley Lab is seeking a Research Technician who is passionate about basic science and being a reliable, collaborative member of an academic research team. Research in the Brantley Lab uses quant...

spartantalent.uncg.edu

Since we had to contend with the heat dome temps, we sadly didn’t make our usual trip to the St. Louis Zoo, and checked out the (somewhat newer) aquarium instead! Now that know I what’s lurking beneath the surface of the Mississippi River… I don’t think I’ll be swimming in it anytime soon 🫣

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Vought doesn’t want control over science. Vought wants to kill these agencies. He doesn't believe tax dollars should be spent on science or social programs. It's not about control; it's destruction. He intends to cancel grants and impound the money. It’s about corruption.

Previously we had shown that axolotl tail regeneration occurs in the absence of somitogenesis. In the updated manuscript we propose that vertebral segmentation during tail regeneration occurs through a process of buckling instability. www.biorxiv.org/content/10.1...

biorxiv.org

Murawala Lab at MDI Bio Lab@murawalalab.bsky.social · 9mo ago

Checkout this updated preprint-a tour de force and truly globe-spanning collaboration with an exceptional group of scientists.

Happy to share our new work from my graduate lab: DynamicAtlas, a morphodynamic atlas of Drosophila development! We develop methods for morphological time alignment of live data. Surprisingly, we find that the kinematics of fly morphogenesis are *very* simple. Enjoy! 
www.nature.com/articles/s41...

DynamicAtlas: a morphodynamic atlas for Drosophila development - Nature Methods

DynamicAtlas integrates fixed and live imaging data to generate a morphodynamic atlas of Drosophila development.

nature.com