Flavio Donato

@flaviodonato82.bsky.social

Interested in all things memory, space, and the infant brain. Assistant Professor @biozentrum @unibasel_en. Donatolab.com 🧠👨🏻‍🔬🏳️‍🌈

The heatwave is finally over - just in time for our “Frosty Foci” to finally come online! ❄️🦠 We found that E. coli builds a transient nucleolus-like ribosome biogenesis compartment during cold adaptation, when RNA (mis)folding makes ribosome biogenesis challenging.

Imaging of activity in the telencephalon of adult zebrafish moving through a virtual reality revealed amazingly precise, structured internal representations of spatial environments. And they get better over time! Great work by Kim! Thanks also to Sriram and Jan. www.biorxiv.org/content/10.6...

Dynamic cognitive representations in the dorsal pallium of adult zebrafish

Brains rely on internal models of the world to interpret sensory input and to simulate the future. In the mammalian hippocampal-entorhinal network, environments are represented by cognitive maps that ...

biorxiv.org

I’m very excited to share our new paper, led by the very talented Jack Bowler, a postdoc in the lab! www.nature.com/articles/s41... We all know that the way we learn something matters. But how does a training curriculum actually shape how the brain learns to solve a problem? a 🧵 1/N

Structured experience shapes strategy learning and neural dynamics in the medial entorhinal cortex - Nature Neuroscience

The authors use recurrent neural networks to predict how structured prior experience shapes neural dynamics as mice learn flexible timing strategies during complex context-dependent behavior.

nature.com

I am proud of this paper. Since it came out in 2022 it has received 0 citations (yes that's a zero). But multiple young scientists have found it useful! (from other labs, so they were not coerced...). Perhaps you will find it useful too? SOME TIPS FOR WRITING SCIENCE doi.org/10.1523/ENEU...

Some Tips for Writing Science

When preparing a scientific paper, we typically write with coauthors who have different backgrounds and styles, and we target readers who have little time and patience. To help both readers and writer...

doi.org

🚀 New preprint 🥳 Fantastic work by our recent PhD graduate Daan ! How are mRNPs remodeled as they exit the nucleus? We identify PAIP1 as a factor that promotes exchange of the nuclear poly(A)-binding protein PABPN1 for cytoplasmic PABPC1, coupling mRNA export to cytoplasmic mRNP maturation.

bioRxiv Molecular Biology@biorxiv-molbio.bsky.social · 2mo ago

PAIP1 couples mRNA export to cytoplasmic mRNP remodeling and poly(A) homeostasis https://www.biorxiv.org/content/10.64898/2026.07.31.742013v1

Two brain circuits. Same learning problem. Shared learning outcomes. Different dynamical implementations. Our work shows that learning is not a single canonical solution but can emerge through distinct population dynamics shaped by circuit architecture. Excited to share our latest preprint! 🧵1/12

bioRxiv Neuroscience@biorxiv-neursci.bsky.social · 4mo ago

Equivalent volitional learning emerges through circuit-specific population dynamics in motor cortex and hippocampus https://www.biorxiv.org/content/10.64898/2026.06.04.730137v1

Two brain circuits. Same learning problem. Shared learning outcomes. Different dynamical implementations. Our work shows that learning is not a single canonical solution but can emerge through distinct population dynamics shaped by circuit architecture. Excited to share our latest preprint! 🧵1/12

bioRxiv Neuroscience@biorxiv-neursci.bsky.social · 4mo ago

Equivalent volitional learning emerges through circuit-specific population dynamics in motor cortex and hippocampus https://www.biorxiv.org/content/10.64898/2026.06.04.730137v1

🚨 New paper in @nature.com We asked why two hippocampal areas with very different anatomy, CA3 and CA1, often seem to code space so similarly? By recording bats flying up to 200m, we found that the difference was hidden by scale! www.nature.com/articles/s41... 🧵 1/11

Sparse-to-dense coding transformation between hippocampal areas CA3 and CA1 - Nature

The hippocampus exhibits a CA3-to-CA1 coding transformation that combines fast learning with an efficient, compressed neural code.

nature.com